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2020 12 21 Open NEST Developer Video Conference

Dennis Terhorst edited this page Dec 21, 2020 · 4 revisions

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Agenda

  1. Welcome
  2. Review of NEST User Mailing List
  3. Project team round
  4. In-depth discussion
    • NeuronGPU

Mailing list

Project team round

Here we discuss topics that need broader attention, for example questions that came up but are outside a single project's scope, larger planned changes/PRs that affect all teams or pending work that is blocked by external factors.

  1. Models / NESTML
    • no updates, looking into triplet STDP synapse from mailing list
  2. PyNEST
    • no news
    • nest-server implemented on pynest, new feature mpi-enabled nest-server coming soon (tested and benchmarked already, docs being updated, PR in January)
  3. Kernel
    • #1741 "free buffers" ready for review
  4. Installation
    • discussed "make install-nodoc", still working on it
  5. Infrastructure
    • no news
  6. Documentation
    • no news
  7. EBRAINS
    • no news
  8. (Feature) Random number generation
    • no news, work still going on
  9. (Feature) Automated Testing
    • discussing issue with parsing nosetest outputs, need to be converted to standard formats, e.g. junit
  10. (Feature) Extension Module System
    • no news, work still going on

In-depth discussion

NeuronGPU

  • Presentation on "NeuronGPU" by Bruno Golosio
  • comparing NEST with NeuronGPU (and with GeNN, CarlSim) w.r.t.
    • average firing rate
    • coeff. of variation of inter-spike intervals (CV-ISI)
    • pearson coefficient
    • network building time
    • simulation time
      • contriburtions of spike handling, neuron dynamics and Poisson generators
    • Models:
      • Potjans&Diesmann (for comparison NEST, GeNN, NeuronGPU)
      • Balanced network Izhikevich+STDP network (for compaison with CarlSim)
      • Balanced network AdEx neurons (for cluster mode with ~50 nodes)
  • NEST NGPU interface
    • by implementing new NEST neuron model to bridge between the simulations
    • interface ports and direct generation of nest SpikeEvents
  • validation with exact overlapping of membrane potentials across whole simulation
  • proposal to transfer NEST initiative
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