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    10 repositories

    • Irys-scaffolding

      Public
      scripts to parse IrysView output
      Perl
      •
      MIT License
      •13•39•3•0•Updated Sep 3, 2015Sep 3, 2015

    • read-cleaning-format-conversion

      Public
      Short scripts to convert or modify Bioinformatics files
      Python
      •
      MIT License
      •5•7•1•0•Updated Sep 2, 2015Sep 2, 2015

    • 2015-07-23-stanford

      Public
      Python
      •
      Other
      •1•0•0•0•Updated Jul 22, 2015Jul 22, 2015

    • genome-annotation-and-comparison

      Public
      Perl
      •
      MIT License
      •2•0•0•0•Updated May 14, 2015May 14, 2015

    • transcriptome-and-genome-assembly

      Public
      Scripts in this repository have been used to assemble de novo transcriptomes and genomes
      Perl
      •
      MIT License
      •3•4•0•0•Updated May 14, 2015May 14, 2015

    • RNA-Seq-annotation-and-comparison

      Public
      Perl
      •
      MIT License
      •3•2•1•0•Updated May 14, 2015May 14, 2015

    • BNGCompare

      Public
      Scripts for summarizing Irys Bionano output
      Perl
      •2•2•0•0•Updated May 14, 2015May 14, 2015

    • FAQ

      Public
      Frequently asked questions about using Github scripts or working on Beocat
      Creative Commons Zero v1.0 Universal
      •1•0•0•0•Updated Aug 29, 2014Aug 29, 2014

    • BAM_and_SAM_files_tools

      Public
      Scripts to summarize alignments and manipulate BAM and SAM alignments files
      MIT License
      •1•0•0•0•Updated Jun 12, 2014Jun 12, 2014

    • IrysOVERview

      Public
      summarize and graph BioNano Genomics' Irys output
      0•1•2•0•Updated Oct 3, 2013Oct 3, 2013