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Turn Simplifying or restructuring existing code or documentation.
usability
Issue affecting user or developer experience.
generate_neurobagel_example_jsonlds.sh
into makefile
refactor
#412
opened Dec 19, 2024 by
alyssadai
Include a valid nipoppy imaging status file in our test data
tests
Enhancing or fixing tests where functioning is not affected.
#406
opened Dec 12, 2024 by
surchs
4 tasks
Investigate running tests on installed involves researching information on a topic rather than implementing specific feature.
bagel
package
phase:research
#380
opened Nov 7, 2024 by
alyssadai
Use Nipoppy schema to validate proc status TSV for bagel derivatives command
#352
opened Oct 1, 2024 by
alyssadai
Use Simplifying or restructuring existing code or documentation.
jsonschema.Validator.validate
for JSON validation
refactor
#338
opened Aug 16, 2024 by
alyssadai
Support multiple participant ID columns in tabular data
flag:discuss
Flag issue that needs to be discussed before it can be implemented.
someday
Not a priority right now, but we want to keep this around to think or discuss more.
#286
opened Mar 26, 2024 by
alyssadai
Investigate [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again
phase:research
involves researching information on a topic rather than implementing specific feature.
bids2table
as more performant alternative to pybids
_flag:stale
#282
opened Mar 18, 2024 by
alyssadai
Raise warning about columns in TSV that have not been annotated
#240
opened Dec 7, 2023 by
alyssadai
Add progress bar for Not a priority right now, but we want to keep this around to think or discuss more.
bagel bids
someday
#189
opened Aug 26, 2023 by
alyssadai
Refactor Good issue for a new contributor.
PR welcome
Issue that is not an internal priority, but external PRs to address it are welcome.
quick fix
Minimal planning and/or implementation work required.
refactor
Simplifying or restructuring existing code or documentation.
get_session_path()
BIDS util to rely only on BIDS Layout
good first issue
#171
opened Jun 19, 2023 by
alyssadai
[ENH] Use logging and let the user reduce the verbosity
#162
opened Jun 15, 2023 by
surchs
1 task done
[BUG] Data dictionary model allows for a continuous BIDS column to have categorical Neurobagel annotations
_flag:stale
[BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again
#152
opened Jun 10, 2023 by
surchs
1 task done
autodoc CLI with typer
documentation
Changes only affect the documentation
#145
opened Jun 1, 2023 by
Remi-Gau
Expand check for unused missing values to all annotated controlled terms
_flag:stale
[BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again
#117
opened Apr 13, 2023 by
alyssadai
Create example phenotypic inputs for no-session-layer BIDS case
good first issue
Good issue for a new contributor.
#100
opened Mar 15, 2023 by
alyssadai
2 tasks
Use informative names for examples used in tests
PR welcome
Issue that is not an internal priority, but external PRs to address it are welcome.
refactor
Simplifying or restructuring existing code or documentation.
#72
opened Feb 16, 2023 by
alyssadai
4 tasks
Select either "heuristic" or "transformation" to describe allowed age Simplifying or restructuring existing code or documentation.
someday
Not a priority right now, but we want to keep this around to think or discuss more.
TermURL
s for within- and across-tool consistency
refactor
#68
opened Feb 14, 2023 by
alyssadai
Restrict image modalities to those we support
documentation
Changes only affect the documentation
flag:discuss
Flag issue that needs to be discussed before it can be implemented.
_flag:stale
[BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again
good first issue
Good issue for a new contributor.
PR welcome
Issue that is not an internal priority, but external PRs to address it are welcome.
#3
opened Aug 3, 2022 by
surchs
ProTip!
Adding no:label will show everything without a label.