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Investigate bids2table as more performant alternative to pybids #282

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alyssadai opened this issue Mar 18, 2024 · 1 comment
Open

Investigate bids2table as more performant alternative to pybids #282

alyssadai opened this issue Mar 18, 2024 · 1 comment
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_flag:stale [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again phase:research involves researching information on a topic rather than implementing specific feature.

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@alyssadai
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https://github.com/childmindresearch/bids2table

The slowest process in the CLI currently is parsing the BIDS dataset, due to limitations of pybids. We previously considered looking into ancpBIDS, but have learned of bids2table which might be even faster for the operations we need.

@alyssadai alyssadai added the phase:research involves researching information on a topic rather than implementing specific feature. label Mar 18, 2024
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github-actions bot commented Jun 3, 2024

We want to keep our issues up to date and active. This issue hasn't seen any activity in the last 75 days.
We have applied the _flag:stale label to indicate that this issue should be reviewed again.
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@github-actions github-actions bot added the _flag:stale [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again label Jun 3, 2024
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Labels
_flag:stale [BOT ONLY] Flag issue that hasn't been updated in a while and needs to be triaged again phase:research involves researching information on a topic rather than implementing specific feature.
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