Fix for issue #23

walaj · Feb 16, 2018 · b0aed4c · b0aed4c
1 parent 6285724
commit b0aed4c
Showing 1 changed file with 6 additions and 0 deletions.
diff --git a/SeqLib/BamReader.h b/SeqLib/BamReader.h
@@ -59,8 +59,14 @@ namespace SeqLib {
 
     // close this bam
     bool close() {
+
       if (!fp)
 	return false;
+
+      // close the cram reference
+      if (fp->fp.cram)
+	cram_close(fp->fp.cram);
+
       fp.reset();
       idx.reset();
       hts_itr.reset();