v3.12.0

3.12.0 (2022-05-10)

Features

• render single sample (#140) (2858ca8)

Bug Fixes

• obtain domain for tick plots in datavzrd report from all related columns (#142) (2e57b12)

v3.11.0

3.11.0 (2022-05-10)

Features

• use Varlociraptor 5.0 (93568d8)

Bug Fixes

• require Varlociraptor 5.0.3 (22a9b91)
• use latest bwa wrapper to avoid an issue with mamba pulling an old r-base as picard dependency (#141) (c533b27)

v3.10.2

3.10.2 (2022-05-02)

Bug Fixes

• defer final output determination to DAG phase (#137) (b551881)

v3.10.1

3.10.1 (2022-04-30)

Bug Fixes

• Handle multiple samples (#134) (3a881bf)

v3.10.0

3.10.0 (2022-04-26)

Features

• render scenario with yte (#132) (6ba7339)

v3.9.0

3.9.0 (2022-04-08)

Features

• use datavzrd for vcf reporting (#115) (631426f)

Bug Fixes

• enable specifying filter-specific vembrane options beyond the filter expression (#121) (5833c45)

v3.8.1

3.8.1 (2022-03-23)

Bug Fixes

• make the fasta index an explicit input of rule filter_group_regions (#124) (402a5d9)

v3.8.0

3.8.0 (2022-03-12)

Features

• genotyping support, minor fixes, performance improvements and config schema updates, preparation for continuous GIAB benchmarking (#90) (d39b8ac)

Bug Fixes

• patch picard syntax usage (#118) (6d66fd6)
• picard syntax in configs and in the mark_duplicates rule (#119) (13982fc)

v3.7.1

3.7.1 (2022-02-23)

Bug Fixes

• custom-report: Replace indexes of ANN-field by keys (#113) (c355bc1)

v3.7.0

3.7.0 (2022-02-17)

Features

• Plot REVEL-scores (#110) (6fb793c)