Merge branch 'draft_assemblies' into more_published_files

sanger-tol · Jun 9, 2024 · 7363ac0 · 7363ac0
2 parents c00c72a + 413a84d
commit 7363ac0
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/conf/base.config b/conf/base.config
@@ -106,7 +106,7 @@ process {
 
     withName: "BLAST_BLASTN" {
         cpus   = { check_max( 24    * task.attempt, 'cpus'    ) }
-        memory = { check_max( 100.MB * task.attempt, 'memory' ) }
+        memory = { check_max( 1.GB * task.attempt, 'memory' ) }
         time   = { check_max( 12.h  * task.attempt, 'time'    ) }
     }
 

diff --git a/conf/modules.config b/conf/modules.config
@@ -134,7 +134,7 @@ process {
     }
 
     withName: "BLAST_BLASTN" {
-        ext.args = "-outfmt '6 qseqid staxids bitscore std' -max_target_seqs 10 -max_hsps 1 -evalue 1.0e-10 -lcase_masking -dust '20 64 1'"
+        ext.args = "-task megablast -outfmt '6 qseqid staxids bitscore std' -max_target_seqs 10 -max_hsps 1 -evalue 1.0e-10 -lcase_masking -dust '20 64 1'"
     }
 
     withName: "CUSTOM_DUMPSOFTWAREVERSIONS" {