bugfix: this should be a megablast

sanger-tol · Jun 9, 2024 · 413a84d · 413a84d
1 parent 5436346
commit 413a84d
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/modules.config b/conf/modules.config
@@ -110,7 +110,7 @@ process {
     }
 
     withName: "BLAST_BLASTN" {
-        ext.args = "-outfmt '6 qseqid staxids bitscore std' -max_target_seqs 10 -max_hsps 1 -evalue 1.0e-10 -lcase_masking -dust '20 64 1'"
+        ext.args = "-task megablast -outfmt '6 qseqid staxids bitscore std' -max_target_seqs 10 -max_hsps 1 -evalue 1.0e-10 -lcase_masking -dust '20 64 1'"
     }
 
     withName: "CUSTOM_DUMPSOFTWAREVERSIONS" {