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Reactome

A curated pathway database

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  1. reactome2py reactome2py Public

    python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.

    Python 27 9

  2. ReactomeGSA ReactomeGSA Public

    R client for the REACTOME Analysis Service for comparative multi-omics gene set analysis

    R 22 4

  3. graph-core graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    Java 17 7

  4. pwp-browser pwp-browser Public

    A tool for visualising and interacting with pathways data

    Java 10 7

  5. container container Public

    🚧 Repository for files for running a Reactome production-like environment inside a docker container. Currently, this project's status is "Work-In-Progress". 🚧

    Perl 9 4

  6. content-service content-service Public

    The new Reactome REST API to access the data

    Java 9 5

Repositories

Showing 10 of 127 repositories
  • release-verifier-lib Public

    A library of common functions for verifying release steps have run successfully

    reactome/release-verifier-lib’s past year of commit activity
    Java 0 0 0 0 Updated Jan 6, 2025
  • reactome/PathwayBrowser’s past year of commit activity
    TypeScript 0 0 0 0 Updated Jan 6, 2025
  • content-service Public

    The new Reactome REST API to access the data

    reactome/content-service’s past year of commit activity
    Java 9 5 1 1 Updated Jan 6, 2025
  • reactome/graph-add-links’s past year of commit activity
    Java 0 0 0 0 Updated Jan 3, 2025
  • reactome_chatbot Public

    This is Reactomes chatbot to its database and search index

    reactome/reactome_chatbot’s past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Dec 24, 2024
  • Pathway-Exchange Public

    Pathway Exchange Code Repository

    reactome/Pathway-Exchange’s past year of commit activity
    Java 0 1 2 0 Updated Dec 24, 2024
  • release-download-directory Public

    Data-release-pipeline: Generation of files for the Reactome website download directory

    reactome/release-download-directory’s past year of commit activity
    Java 0 1 10 1 Updated Dec 20, 2024
  • pwp-browser Public

    A tool for visualising and interacting with pathways data

    reactome/pwp-browser’s past year of commit activity
    Java 10 7 0 0 Updated Dec 20, 2024
  • graph-core Public

    Models the Reactome knowledgebase into a interconnected graph

    reactome/graph-core’s past year of commit activity
    Java 17 7 1 0 Updated Dec 20, 2024
  • release_gocam Public

    This pipeline generates go-cam ttl files from biopax and validates them

    reactome/release_gocam’s past year of commit activity
    Shell 0 Apache-2.0 0 0 0 Updated Dec 17, 2024

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