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Large update to how initial processing paf files are parsed (implications for wt and npev calls) piranha #544: Pull request #222 opened by aineniamh
February 28, 2024 14:29 7m 42s wt-dev
wt-dev
February 28, 2024 14:29 7m 42s
replacing string occurances of fasta and fastq with the keys piranha #543: Commit 1c10045 pushed by aineniamh
February 28, 2024 14:20 8m 26s wt-dev
wt-dev
February 28, 2024 14:20 8m 26s
updating min reads to 20 piranha #542: Commit e87cb64 pushed by aineniamh
February 28, 2024 14:16 7m 36s wt-dev
wt-dev
February 28, 2024 14:16 7m 36s
updating the config strings with hit parsing strings piranha #541: Commit fc60272 pushed by aineniamh
February 28, 2024 12:30 7m 33s wt-dev
wt-dev
February 28, 2024 12:30 7m 33s
now reporting actual hit and the hit that gets counted as top hit per… piranha #540: Commit 628b907 pushed by aineniamh
February 28, 2024 12:28 2m 39s wt-dev
wt-dev
February 28, 2024 12:28 2m 39s
updating to write out multimapped references piranha #539: Commit 03a662f pushed by aineniamh
February 26, 2024 15:29 7m 20s wt-dev
wt-dev
February 26, 2024 15:29 7m 20s
default map q is now 0 piranha #538: Commit 4a02fc1 pushed by aineniamh
February 23, 2024 12:14 7m 10s wt-dev
wt-dev
February 23, 2024 12:14 7m 10s
Merge branch 'main' of https://github.com/aineniamh/piranha into main piranha #537: Commit 6c730ae pushed by aineniamh
February 14, 2024 16:01 6m 47s main
main
February 14, 2024 16:01 6m 47s
Update README.md piranha #536: Commit 4d36d20 pushed by aineniamh
February 6, 2024 13:20 7m 3s main
main
February 6, 2024 13:20 7m 3s
Update README.md piranha #535: Commit deae910 pushed by aineniamh
February 6, 2024 13:17 6m 38s main
main
February 6, 2024 13:17 6m 38s
Merge pull request #220 from Desperate-Dan/patch-1 piranha #534: Commit cffddd5 pushed by aineniamh
February 6, 2024 13:09 6m 16s main
main
February 6, 2024 13:09 6m 16s
Update README.md piranha #533: Pull request #220 opened by Desperate-Dan
February 6, 2024 12:43 6m 50s Desperate-Dan:patch-1
Desperate-Dan:patch-1
February 6, 2024 12:43 6m 50s
updating readme with archive info piranha #532: Commit 4908973 pushed by aineniamh
January 29, 2024 17:20 6m 32s main
main
January 29, 2024 17:20 6m 32s
Merge pull request #218 from polio-nanopore/copy-fq piranha #531: Commit c29ba15 pushed by aineniamh
January 29, 2024 17:13 6m 51s main
main
January 29, 2024 17:13 6m 51s
Copy fq piranha #530: Pull request #218 opened by aineniamh
January 29, 2024 17:13 6m 50s copy-fq
copy-fq
January 29, 2024 17:13 6m 50s
dont archive fastq by default piranha #529: Commit 7a98545 pushed by aineniamh
January 29, 2024 16:58 6m 55s copy-fq
copy-fq
January 29, 2024 16:58 6m 55s
Merge pull request #217 from polio-nanopore/ev-dev piranha #528: Commit 2ca977d pushed by aineniamh
January 29, 2024 16:57 6m 52s main
main
January 29, 2024 16:57 6m 52s
new variables for archiving fastq_pass piranha #527: Commit 5534139 pushed by aineniamh
January 29, 2024 16:56 2m 35s copy-fq
copy-fq
January 29, 2024 16:56 2m 35s
Configurable categories for grouping by, configurable header fields in detailed csv- but dynamically picks. piranha #526: Pull request #217 synchronize by aineniamh
January 29, 2024 16:12 6m 37s ev-dev
ev-dev
January 29, 2024 16:12 6m 37s
adding config ev example piranha #525: Commit 19c6b2d pushed by aineniamh
January 29, 2024 16:12 7m 12s ev-dev
ev-dev
January 29, 2024 16:12 7m 12s
Configurable categories for grouping by, configurable header fields in detailed csv- but dynamically picks. piranha #524: Pull request #217 synchronize by aineniamh
January 29, 2024 15:19 6m 56s ev-dev
ev-dev
January 29, 2024 15:19 6m 56s
udpating samtools and bcftools versions piranha #523: Commit a37581d pushed by aineniamh
January 29, 2024 15:19 7m 25s ev-dev
ev-dev
January 29, 2024 15:19 7m 25s
Configurable categories for grouping by, configurable header fields in detailed csv- but dynamically picks. piranha #522: Pull request #217 synchronize by aineniamh
January 29, 2024 14:36 1m 27s ev-dev
ev-dev
January 29, 2024 14:36 1m 27s
Merge branch 'ev-dev' of https://github.com/aineniamh/piranha into ev… piranha #521: Commit 5cf337a pushed by aineniamh
January 29, 2024 14:36 1m 36s ev-dev
ev-dev
January 29, 2024 14:36 1m 36s
Configurable categories for grouping by, configurable header fields in detailed csv- but dynamically picks. piranha #520: Pull request #217 opened by aineniamh
January 29, 2024 14:33 1m 23s ev-dev
ev-dev
January 29, 2024 14:33 1m 23s