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Analysis pipeline code for ASL data from The Irish Longitudinal stuDy on Ageing

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TILDA_ASL

Analysis pipeline code for ASL data from The Irish Longitudinal study on Ageing.

Data Characterics

474 subjects (T1+pcASL) were available after preprocessing, and 423 subjects were used for this study, details were explained in the derived paper [1].

Pre-Processing pipeline

All related processing scripts are located in the script folder.

T1w images

T1 images were processed using HCP pipeline on High Performance Computer Ada of University of Nottingham.

ASL images

Oxasl [2] was used to process the ASL data. Partial Volumes (PVs) from FAST were used for the volumetric pipeline, while PVs from Toblerone were used for the surface-based pipeline. Multimodel Suface Matching (MSM) from HCP workbench was used to project ASL images onto the cortical surface.

Statistical Analysis

Quality Control Report

[1] Hu, J., Craig, M. S., Knight, S. P., De Looze, C., Meaney, J. F., Kenny, R. A., Chen, X., & Chappell, M. A. (2024). Regional changes in cerebral perfusion with age when accounting for changes in gray-matter volume. Magnetic resonance in medicine, 10.1002/mrm.30376. Advance online publication. https://doi.org/10.1002/mrm.30376

[2] https://github.com/physimals/oxasl

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Analysis pipeline code for ASL data from The Irish Longitudinal stuDy on Ageing

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