Make sure variable repeats are passed to asl_file when re-doing subtr…

…action
physimals · Nov 14, 2018 · ac17526 · ac17526
1 parent 2534036
commit ac17526
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/oxford_asl.in b/oxford_asl.in
@@ -1684,7 +1684,7 @@ if [ ! -z $repeatsubtract ]; then
 	asl_file --data=$tempdir/asldata --ntis=$ntis --ibf=$ibf --iaf=$iaf --obf=tis --out=$tempdir/diffdata --mean=$tempdir/diffdata_mean
     else
 	# create label-control difference data using asl_file - this gets it into the right block form for BASIL (blocks of TIs)
-	asl_file --data=$tempdir/asldata --ntis=$ntis --ibf=$ibf --iaf=$iaf --obf=tis --diff --out=$tempdir/diffdata --mean=$tempdir/diffdata_mean
+	asl_file --data=$tempdir/asldata --ntis=$ntis --ibf=$ibf $afrptstr --iaf=$iaf --obf=tis --diff --out=$tempdir/diffdata --mean=$tempdir/diffdata_mean
     fi
 fi
 ### End of: Distortion Correction