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Merge branch 'master' into release
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mcraig-ibme committed Jun 20, 2017
2 parents 8f22999 + c9d1de8 commit 349e406
Showing 1 changed file with 2 additions and 1 deletion.
3 changes: 2 additions & 1 deletion quasil.in
Original file line number Diff line number Diff line change
Expand Up @@ -367,7 +367,8 @@ if [ -z "$calibcmds" ]; then
${FSLDIR}/bin/immv calib/mean_M0t calib/M0t

#fslmaths instruction for calibration (for execution whilst back in starting dir)
cinstr=" -div $tempdir/calib/M0t -mul 0.9 " # partition coefficient 0.9
#cinstr=" -div $tempdir/calib/M0t -mul 0.9 " # partition coefficient 0.9
cinstr=" -div $tempdir/calib/M0t -div 0.9 " # partition coefficient 0.9

#save calibration results to output directory for reference
${FSLDIR}/bin/imcp calib/M0t $outdir/M0t
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