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Fix specifier authorities and other bugs in Regnum to Phyx generation #80

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Fix specifier authorities and other bugs in Regnum to Phyx generation #80

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Commits on Aug 25, 2020

  1. Fix: specifier authorities now written correctly.

    @gaurav
    gaurav committed Aug 25, 2020
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  2. Removed folders named 'scripts/' from encryption.

    @gaurav
    gaurav committed Aug 25, 2020
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  3. Added a script for mass-converting Phyx files into OWL ontologies.

    @gaurav
    gaurav committed Aug 25, 2020
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  4. Changed default number of digits to 7. 

    This is the same as used by CDAO. Also made this into a command line
argument.
    @gaurav
    gaurav committed Aug 25, 2020
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Commits on Aug 26, 2020

  1. Fixed author separators.

    @gaurav
    gaurav committed Aug 26, 2020
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  2. Added script to fix part of Phyx file.

    @gaurav
    gaurav committed Aug 26, 2020
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  3. Fixed specifier authorities in Phyx files.

    @gaurav
    gaurav committed Aug 26, 2020
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Commits on Jul 2, 2021

  1. Moved encrypted Phylonym Phyx out of encrypted/. 

    This unencrypts it.
    @gaurav
    gaurav committed Jul 2, 2021
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  2. Deleted two test clade definitions.

    @gaurav
    gaurav committed Jul 2, 2021
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  3. Added a test for Newick strings in input files.

    @gaurav
    gaurav committed Jul 2, 2021
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Commits on Jul 11, 2021

  1. Add a GitHub action to test this repo.

    @gaurav
    gaurav committed Jul 11, 2021
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Commits on Jul 12, 2021

  1. Made some tests optional; fixed tests.

    @gaurav
    gaurav committed Jul 12, 2021
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