fix indexing part

pdimens · Aug 1, 2024 · 49fdd56 · 49fdd56
1 parent b5d0a91
commit 49fdd56
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/harpy/bin/concatenate_bam.py b/src/harpy/bin/concatenate_bam.py
@@ -94,4 +94,4 @@
                     pass
                 bam_out.write(record)
 
-pysam.index(bam_out)
+pysam.index(args.out)