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move pysam into main env #149

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move pysam into main env

move pysam into main env #149

Triggered via pull request June 28, 2024 19:39
@pdimenspdimens
synchronize #93
91-add-pysam-as-direct-dependency
Status Cancelled
Total duration 19m 14s
Artifacts 1

tests.yml

on: pull_request
Detect File Changes
6s
Detect File Changes
Build/Cache Container
9m 2s
Build/Cache Container
demux gen1
0s
demux gen1
preflight
5m 26s
preflight
qc
9m 44s
qc
align BWA
7m 49s
align BWA
align EMA
8m 4s
align EMA
align strobe
6m 11s
align strobe
mpileup
0s
mpileup
freebayes
0s
freebayes
impute
0s
impute
phase
0s
phase
sv leviathan
0s
sv leviathan
sv naibr
0s
sv naibr
simulate variants
0s
simulate variants
simulate linkedreads
0s
simulate linkedreads
harpy extras
0s
harpy extras
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10 errors and 1 warning
preflight
Process completed with exit code 1.
preflight
Process completed with exit code 1.
align strobe
Process completed with exit code 1.
align BWA
The run was canceled by @pdimens.
align BWA
The operation was canceled.
align EMA
The run was canceled by @pdimens.
align EMA
The operation was canceled.
qc
The run was canceled by @pdimens.
qc
Process completed with exit code 1.
qc
Process completed with exit code 1.
Detect File Changes
'base' input parameter is ignored when action is triggered by pull request event

Artifacts

Produced during runtime
Name Size
deps-image Expired
1.35 GB