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revisit downsample as a better SM workflow #467

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revisit downsample as a better SM workflow

revisit downsample as a better SM workflow #467

Triggered via pull request December 11, 2024 14:40
@pdimenspdimens
synchronize #173
downsample_revisit
Status Success
Total duration 1h 0m 44s
Artifacts 1

tests.yml

on: pull_request
Detect File Changes
32s
Detect File Changes
Build/Cache Container
13m 40s
Build/Cache Container
demux gen1
29m 53s
demux gen1
preflight
14m 10s
preflight
qc
21m 36s
qc
deconvolve
9m 13s
deconvolve
align BWA
16m 50s
align BWA
align EMA
21m 44s
align EMA
align strobe
14m 11s
align strobe
mpileup
16m 33s
mpileup
freebayes
40m 2s
freebayes
impute
30m 50s
impute
phase
37m 26s
phase
sv leviathan
22m 44s
sv leviathan
sv naibr
40m 5s
sv naibr
simulate variants
45m 56s
simulate variants
simulate linkedreads
24m 18s
simulate linkedreads
metassembly
43m 47s
metassembly
harpy extras
2m 55s
harpy extras
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Annotations

20 warnings
Detect File Changes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Detect File Changes
'base' input parameter is ignored when action is triggered by pull request event
Build/Cache Container
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
harpy extras
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
deconvolve
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
align strobe
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
preflight
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
mpileup
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
align BWA
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
qc
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
align EMA
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
sv leviathan
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
simulate linkedreads
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
demux gen1
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
impute
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
phase
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
freebayes
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
sv naibr
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
metassembly
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
simulate variants
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636

Artifacts

Produced during runtime
Name Size
deps-image Expired
2.31 GB