Removing the prescription of jupytext and its presence from the cookiecutter
#267
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| name: Run Cookiecutter Tests | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| debug_enabled: | |
| description: "Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)" | |
| required: false | |
| default: false | |
| pull_request: | |
| push: | |
| branches: | |
| - master | |
| jobs: | |
| run_test: | |
| strategy: | |
| matrix: | |
| os: | |
| - ubuntu-latest | |
| - macos-latest | |
| python-version: ["3.8", "3.9", "3.10", "3.11"] | |
| runs-on: ${{ matrix.os }} | |
| name: Run pytest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| activate-environment: test | |
| channels: conda-forge,nodefaults | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install Mac dependencies | |
| if: runner.os == 'macOS' | |
| run: | | |
| brew install coreutils direnv | |
| which python | |
| python -m pip install --upgrade pip | |
| python -m pip install -r requirements.txt | |
| conda config --remove channels defaults | |
| conda config --add channels conda-forge | |
| conda config --add channels nodefaults | |
| $CONDA/bin/conda init bash | |
| - name: Fix Conda permissions on macOS | |
| if: runner.os == 'macOS' | |
| run: sudo chown -R $UID $CONDA | |
| - name: Install Linux dependencies | |
| if: runner.os == 'Linux' | |
| run: | | |
| sudo apt-get update -y && sudo apt-get install -y direnv | |
| which python | |
| python -m pip install --upgrade pip | |
| python -m pip install -r requirements.txt | |
| conda config --remove channels defaults | |
| conda config --add channels conda-forge | |
| conda config --add channels nodefaults | |
| $CONDA/bin/conda init bash | |
| - name: Build docs | |
| run: | | |
| cd docs | |
| which python | |
| python -m mkdocs build | |
| - name: Git config | |
| run: | | |
| git config --global user.email [email protected] | |
| git config --global user.name "Github Actions" | |
| - name: "Set up SSH agent" | |
| uses: webfactory/[email protected] | |
| with: | |
| ssh-private-key: ${{ secrets.SSH_PRIVATE_KEY }} | |
| - name: "Add GitHub to the SSH known hosts file" | |
| run: | | |
| for ip in $(dig @8.8.8.8 github.com +short); do \ | |
| ssh-keyscan github.com,$ip; \ | |
| ssh-keyscan $ip; \ | |
| done 2>/dev/null >> ~/.ssh/known_hosts | |
| - name: Setup tmate session | |
| if: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.debug_enabled }} | |
| uses: mxschmitt/action-tmate@v3 | |
| with: | |
| limit-access-to-actor: true | |
| - name: Run pytest | |
| run: | | |
| which python | |
| python -m pytest -vvv |