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Add DT and update tidyverse version #13

Merged
merged 10 commits into from
Mar 13, 2024
Merged
7 changes: 2 additions & 5 deletions base_ottr/Dockerfile
Original file line number Diff line number Diff line change
@@ -1,4 +1,4 @@
FROM rocker/tidyverse:4.0.2
FROM rocker/tidyverse:4.3.2
LABEL maintainer="[email protected]"
WORKDIR /rocker-build/

Expand All @@ -19,9 +19,6 @@ RUN curl -fsSL https://cli.github.com/packages/githubcli-archive-keyring.gpg | g
RUN echo "deb [arch=$(dpkg --print-architecture) signed-by=/usr/share/keyrings/githubcli-archive-keyring.gpg] https://cli.github.com/packages stable main" | tee /etc/apt/sources.list.d/github-cli.list > /dev/null;
RUN apt update && apt install -y gh;

# Remove old symlinks to old pandoc
RUN unlink /usr/lib/rstudio-server/bin/pandoc/pandoc

# Uninstall old version of pandoc
RUN sudo apt-get purge pandoc pandoc-citeproc pandoc-data \
&& sudo apt-get autoremove --purge
Expand All @@ -31,7 +28,7 @@ RUN wget https://github.com/jgm/pandoc/releases/download/2.14.1/pandoc-2.14.1-1-
&& sudo apt-get install ./pandoc-2.14.1-1-amd64.deb

# Create new symlinks
RUN ln -s /usr/bin/pandoc /usr/lib/rstudio-server/bin/pandoc/pandoc
RUN ln -s /usr/bin/pandoc /usr/lib/rstudio-server/bin/pandoc

# Add curl, bzip2
RUN apt-get update -qq && apt-get -y --no-install-recommends install \
Expand Down
9 changes: 5 additions & 4 deletions base_ottr/github_package_list.tsv
Original file line number Diff line number Diff line change
@@ -1,8 +1,9 @@
rstudio/rmarkdown 02d3c2512686fda9c14c2a0e300aa02525f16ca5
yihui/xfun 74c2a6605d8f0fb19314da542baeead6dc8697d9
yihui/knitr a1052d12e0ff8f4ead365b4c85ef5835faa1c492
rstudio/rmarkdown HEAD
yihui/xfun HEAD
yihui/knitr HEAD
jhudsl/ottrpal HEAD
tidyverse/rvest 4fe39fb5089512d77b6a9cc026e5c895258ff6ce
R-lib/testthat e99155af85261e065192feb946dcfa6679cffae4
rstudio/bookdown 88bc4ead8562ea281838041c795b38fc4a6a7165
rstudio/bookdown HEAD
jhudsl/cow HEAD
rstudio/DT HEAD
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