v1.1.1

[1.1.1] - 2024-07-05

Added

• Support Xenium multimodal segmentation as a prior for Baysor (#80)
• For snakemake, you can set a BAYSOR_EXECUTABLE_PATH environment variable to indicate the path of the Baysor executable
• Added ComSeg segmentation by @tdefa (#76)

Fix

• Fix Xenium reader issue for recent machine versions (#80)
• Fix type issue (DataTree and DataArray) related to spatialdata>=0.2.0 (#85)
• Fix sjoin issue related to geopandas>=1.0.0

Changed

• Fully depends on spatialdata-io for the MERSCOPE and the Xenium reader
• Use DataArray and DataTree typing instead of (Multiscale)SpatialImage (as in spatialdata>=0.2.0)