Sacha_CyCMV-FLU_2024

Details the analysis bulk RNA sequencing of whole blood in Cynomolgus Macaques given CyCMV/flu vectors

Codes for trimming, filtering, alignment and counting in Preprocessingcodes/ folder

• Note: as is these codes are likely not reproducible on another system. Provided so that interested parties can see parameters that were used at each preprocessing step

R code for analysis in the Analysis/ folder

Data

Count matrix and raw fastq files can be found here https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268204

Citation