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{bio}[system/system] CellRanger v9.0.0 #21934

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PhoenixEmik
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(created using eb --new-pr)

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Updated software CellRanger-9.0.0.eb

Diff against CellRanger-8.0.1.eb

easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.1.eb

diff --git a/easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.1.eb b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
index baa6b09543..b25f6cc0d7 100644
--- a/easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.1.eb
+++ b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
@@ -4,7 +4,7 @@
 easyblock = 'Tarball'
 
 name = 'CellRanger'
-version = '8.0.1'
+version = '9.0.0'
 
 homepage = 'https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger'
 description = """Cell Ranger is a set of analysis pipelines that process Chromium
@@ -17,7 +17,7 @@ download_instructions = """
 Download manually from https://support.10xgenomics.com/single-cell-gene-expression/software/downloads/latest
 """
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['ea2a35ac0f03961bab2ea485565d60cc6709a981c833a5e6c2b13a8fef641e81']
+checksums = ['d57e574630bc0871299ba0e3e3b9a770b572cd35a819c52bfd58403ccd72035d']
 
 keepsymlinks = True
 
Diff against CellRanger-8.0.0.eb

easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.0.eb

diff --git a/easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.0.eb b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
index db95a8aae2..b25f6cc0d7 100644
--- a/easybuild/easyconfigs/c/CellRanger/CellRanger-8.0.0.eb
+++ b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
@@ -4,7 +4,7 @@
 easyblock = 'Tarball'
 
 name = 'CellRanger'
-version = '8.0.0'
+version = '9.0.0'
 
 homepage = 'https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger'
 description = """Cell Ranger is a set of analysis pipelines that process Chromium
@@ -17,7 +17,7 @@ download_instructions = """
 Download manually from https://support.10xgenomics.com/single-cell-gene-expression/software/downloads/latest
 """
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['58b077b66b2b48966b3712a1f16a61be938237addbdf611a7a924bc99211bca6']
+checksums = ['d57e574630bc0871299ba0e3e3b9a770b572cd35a819c52bfd58403ccd72035d']
 
 keepsymlinks = True
 
Diff against CellRanger-7.2.0.eb

easybuild/easyconfigs/c/CellRanger/CellRanger-7.2.0.eb

diff --git a/easybuild/easyconfigs/c/CellRanger/CellRanger-7.2.0.eb b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
index f02ee42a83..b25f6cc0d7 100644
--- a/easybuild/easyconfigs/c/CellRanger/CellRanger-7.2.0.eb
+++ b/easybuild/easyconfigs/c/CellRanger/CellRanger-9.0.0.eb
@@ -4,7 +4,7 @@
 easyblock = 'Tarball'
 
 name = 'CellRanger'
-version = '7.2.0'
+version = '9.0.0'
 
 homepage = 'https://support.10xgenomics.com/single-cell-gene-expression/software/pipelines/latest/what-is-cell-ranger'
 description = """Cell Ranger is a set of analysis pipelines that process Chromium
@@ -17,7 +17,7 @@ download_instructions = """
 Download manually from https://support.10xgenomics.com/single-cell-gene-expression/software/downloads/latest
 """
 sources = [SOURCELOWER_TAR_GZ]
-checksums = ['b092bd4e3ab585ad051a231fbdd8f3f0f5cbcd10f657eeab86bec98cd594502c']
+checksums = ['d57e574630bc0871299ba0e3e3b9a770b572cd35a819c52bfd58403ccd72035d']
 
 keepsymlinks = True
 

@PhoenixEmik
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Test report by @PhoenixEmik
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
rocky-8-build - Linux Rocky Linux 8.10, x86_64, AMD Ryzen 7 7840HS w/ Radeon 780M Graphics, Python 3.6.8
See https://gist.github.com/PhoenixEmik/e69d41bae8a46368eca93b71f0cd674e for a full test report.

@verdurin
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Test report by @verdurin
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
easybuild-el8.cloud.in.bmrc.ox.ac.uk - Linux Rocky Linux 8.10, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/fe5cadf4138e9751edde9cdfa2b5f584 for a full test report.

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Looks fine.

@verdurin verdurin added this to the release after 4.9.4 milestone Nov 29, 2024
@verdurin
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Going in, thanks @PhoenixEmik!

@verdurin verdurin merged commit f431930 into easybuilders:develop Nov 29, 2024
10 checks passed
@PhoenixEmik PhoenixEmik deleted the 20241129103427_new_pr_CellRanger900 branch December 1, 2024 05:36
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2 participants