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Added initial code for density maps #83

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Added initial code for reading a density map from a .mrc file.
Added corresponding tests.
Added a Jupyter notebook for test and visualization.

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@artajmir3 artajmir3 mentioned this pull request May 7, 2022
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@ninamiolane ninamiolane left a comment

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@artajmir3 thank you so much for your PR!

Could add a test for your notebook, by copy-pasting the file test_notebooks.py here:
https://github.com/compSPI/ioSPI/pull/75/files#diff-c12d9e359c589e405a132b291f892d640e0fd4b9bc459759d91f152ddc8c5571

If this passes, then we can merge. Thanks for the great work!

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Marking as draft for now since the tests are not passing.

Some indications:

  • You can add the notebooks that are not yours in a list NOTEBOOKS_TO_SKIP in test_notebooks.py : since it is not your job to debug someone else's notebook
  • Can you investigate what the other errors are? Thanks 🙌

@ninamiolane ninamiolane marked this pull request as draft May 10, 2022 19:33
@artajmir3 artajmir3 marked this pull request as ready for review May 10, 2022 20:27
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2 participants