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Main changes to dev #21

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wants to merge 103 commits into from
Closed

Main changes to dev #21

wants to merge 103 commits into from

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PaulMelloy
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Update the dev branch with the changes on the main branch

PaulMelloy and others added 30 commits March 8, 2024 14:08
@PaulMelloy
move temp_index to it's own file
6274b82
@PaulMelloy
move moisture_index to own file
24f38a9
@PaulMelloy
auxilary functions, keep in dev
38eb985
@PaulMelloy
remove spore_rate and inf_rate for racca methods
febb76d
@PaulMelloy
remove racca method functionality from 'main'
bf93c41
@PaulMelloy
remove auxillary functions and tests
bdeacde
@PaulMelloy
remove extra line breaks
02b0d01
@PaulMelloy
remove auxiually docs
541a422
@PaulMelloy
wrap calculation with list DT
466d2e2
@PaulMelloy
move packages to suggests
8183832
@PaulMelloy
remove aux functions
251d0c2
@PaulMelloy
amend tests without racca outputs
e80948d
@PaulMelloy
remove racca ref from vig
e9d7a62
@PaulMelloy
doc
99b8f78
@ReneHeim
Update README.md
e4ece37
@PaulMelloy
deploy pkgdown site
bc72052
@PaulMelloy
Update title and DESCRIPTION use Ropen template
efbe9a1
@PaulMelloy
Merge branch 'main' of https://github.com/PaulMelloy/cercospoRa
010a84e
@PaulMelloy
logo and negative pm
d11082d
@PaulMelloy
github doc
e7aa014
@PaulMelloy
fix image
14073b4
@PaulMelloy
missed !
76d77fc
@PaulMelloy
add raw address
cb1176d
@PaulMelloy
change theme
79c8674
@PaulMelloy
use_github_pages
1e3e4ad
@PaulMelloy
try installing epiphytoolR on actions
081b9c3
@PaulMelloy
extra repositories
bb72eb5
@PaulMelloy
try again for extra_packages and remotes Des
d15630a
@PaulMelloy
missing comma
4a74c47
@PaulMelloy
another
995822d
@PaulMelloy
ignore Rprofile
c5ff592
@PaulMelloy
add pattern to file detection
ff84a29
@PaulMelloy
add parameter for respective img dates see #18
a04b79b
@PaulMelloy
amend test in line with function changes #18
582ecf5
@PaulMelloy
set the raster name as image date return raster
3c231d1
@PaulMelloy
replace img with param_r
a47c02d
@PaulMelloy
use names
26b2cc5
@PaulMelloy
lint
6a9e7f7
@PaulMelloy
adjust t0 assignment return object
7b029bf
@PaulMelloy
update tests in line with code changes
c7ff0d1
@PaulMelloy
Remove loop and use terra::app #19
5c612e0
@PaulMelloy
fix example
e2f2bc4
@PaulMelloy
return with t0 as posix
0b3698f
@PaulMelloy
allow a vector to be supplied to c_closure
dc78711 
For calc_epidemic_onset_from_image()
@PaulMelloy
delete white space
3e3f64d
@PaulMelloy
sapply to loop for c_closure image processing
c96a774
@PaulMelloy
use terra::app for function
f23344a
@PaulMelloy
correct example with full names
141ab27
@PaulMelloy
redoc passing all tests
7b6b8f1
@PaulMelloy
alter tests to allow for new changes
bc75d8f
@PaulMelloy
update return documentation #17
e43cf32
@PaulMelloy
updated vignette to show calc epidemic from LAI
0017775
@PaulMelloy
move DIV and nasa power example to new vignette
8f83eff
@PaulMelloy
As per discussion in issue #22
0edd9ff
@PaulMelloy
update licence to be explicit with CC-BY-SA
4ec861c
@PaulMelloy
correct citation format
6a03a78
@PaulMelloy
remove redundant commented code
8121bae
@PaulMelloy PaulMelloy closed this Sep 25, 2024
@PaulMelloy PaulMelloy reopened this Sep 25, 2024
@PaulMelloy PaulMelloy closed this Nov 2, 2024
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3 participants
@PaulMelloy @ReneHeim @nathanokole