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Update installation documentation to improve clarity and formatting
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SorenHeidelbach committed Dec 19, 2024
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Expand Up @@ -21,15 +21,15 @@ python3 -m venv nanomotif
source nanomotif/bin/activate
pip install nanomotif
```

---
## Check Installation
Once installed, the installation can be checked by running:
```shell
nanomotif check-installation
```
This runs a test run on a small dataset, ensuring everything works.


---
## MTase-linker Installation
The MTase-Linker module has additional dependencies that are not automatically installed with Nanomotif. Therefore, before using this module, you must manually install these dependencies using the `MTase-linker install` command.
The `MTase-linker` module requires that conda is available on your system.
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