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Add new RRSwISC6to18E3r5 ocean and sea-ice mesh #6447

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173 changes: 157 additions & 16 deletions cime_config/config_grids.xml

Large diffs are not rendered by default.

2 changes: 1 addition & 1 deletion components/elm/bld/namelist_files/namelist_definition.xml
Original file line number Diff line number Diff line change
Expand Up @@ -1423,7 +1423,7 @@ Representative concentration pathway for future scenarios [radiative forcing at

<entry id="mask" type="char*20" category="default_settings"
group="default_settings"
valid_values="USGS,gx3v7,gx1v6,navy,test,tx0.1v2,tx1v1,T62,TL319,cruncep,oEC60to30v3,oEC60to30v3wLI,ECwISC30to60E1r2,EC30to60E2r2,WC14to60E2r3,WCAtl12to45E2r4,SOwISC12to60E2r4,ECwISC30to60E2r1,oRRS18to6,oRRS18to6v3,oRRS15to5,oARRM60to10,oARRM60to6,ARRM10to60E2r1,oQU480,oQU240,oQU240wLI,oQU120,oRRS30to10v3,oRRS30to10v3wLI,360x720cru,NLDASww3a,NLDAS,tx0.1v2,ICOS10,IcoswISC30E3r5,IcosXISC30E3r7">
valid_values="USGS,gx3v7,gx1v6,navy,test,tx0.1v2,tx1v1,T62,TL319,cruncep,oEC60to30v3,oEC60to30v3wLI,ECwISC30to60E1r2,EC30to60E2r2,WC14to60E2r3,WCAtl12to45E2r4,SOwISC12to60E2r4,ECwISC30to60E2r1,oRRS18to6,oRRS18to6v3,oRRS15to5,oARRM60to10,oARRM60to6,ARRM10to60E2r1,oQU480,oQU240,oQU240wLI,oQU120,oRRS30to10v3,oRRS30to10v3wLI,360x720cru,NLDASww3a,NLDAS,tx0.1v2,ICOS10,IcoswISC30E3r5,IcosXISC30E3r7,RRSwISC6to18E3r5">
Land mask description
</entry>

Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -54,6 +54,7 @@
<config_dt ocn_grid="FRISwISC04to60E3r1">'00:04:00'</config_dt>
<config_dt ocn_grid="FRISwISC02to60E3r1">'00:02:00'</config_dt>
<config_dt ocn_grid="FRISwISC01to60E3r1">'00:01:00'</config_dt>
<config_dt ocn_grid="RRSwISC6to18E3r5">'00:05:00'</config_dt>
<config_time_integrator>'split_explicit_ab2'</config_time_integrator>
<config_number_of_time_levels>2</config_number_of_time_levels>

Expand Down Expand Up @@ -83,6 +84,7 @@
<config_hmix_scaleWithMesh ocn_grid="FRISwISC04to60E3r1">.true.</config_hmix_scaleWithMesh>
<config_hmix_scaleWithMesh ocn_grid="FRISwISC02to60E3r1">.true.</config_hmix_scaleWithMesh>
<config_hmix_scaleWithMesh ocn_grid="FRISwISC01to60E3r1">.true.</config_hmix_scaleWithMesh>
<config_hmix_scaleWithMesh ocn_grid="RRSwISC6to18E3r5">.true.</config_hmix_scaleWithMesh>
<config_maxMeshDensity>-1.0</config_maxMeshDensity>
<config_hmix_use_ref_cell_width>.false.</config_hmix_use_ref_cell_width>
<config_hmix_ref_cell_width>30.0e3</config_hmix_ref_cell_width>
Expand Down Expand Up @@ -149,6 +151,7 @@
<config_mom_del4 ocn_grid="FRISwISC04to60E3r1">4.37e08</config_mom_del4>
<config_mom_del4 ocn_grid="FRISwISC02to60E3r1">5.46e07</config_mom_del4>
<config_mom_del4 ocn_grid="FRISwISC01to60E3r1">6.83e06</config_mom_del4>
<config_mom_del4 ocn_grid="RRSwISC6to18E3r5">3.2e09</config_mom_del4>
<config_mom_del4_div_factor>1.0</config_mom_del4_div_factor>
<config_use_tracer_del4>.false.</config_use_tracer_del4>
<config_tracer_del4>0.0</config_tracer_del4>
Expand All @@ -165,6 +168,7 @@
<config_use_Redi ocn_grid="oRRS30to10v3wLI">.false.</config_use_Redi>
<config_use_Redi ocn_grid="oRRS18to6v3">.false.</config_use_Redi>
<config_use_Redi ocn_grid="oRRS15to5">.false.</config_use_Redi>
<config_use_Redi ocn_grid="RRSwISC6to18E3r5">.false.</config_use_Redi>
<config_Redi_closure>'constant'</config_Redi_closure>
<config_Redi_constant_kappa>400.0</config_Redi_constant_kappa>
<config_Redi_constant_kappa ocn_forcing="datm_forced_restoring">400.0</config_Redi_constant_kappa>
Expand Down Expand Up @@ -203,6 +207,7 @@
<config_use_GM ocn_grid="oRRS30to10v3wLI">.false.</config_use_GM>
<config_use_GM ocn_grid="oRRS18to6v3">.false.</config_use_GM>
<config_use_GM ocn_grid="oRRS15to5">.false.</config_use_GM>
<config_use_GM ocn_grid="RRSwISC6to18E3r5">.false.</config_use_GM>
<config_GM_closure>'EdenGreatbatch'</config_GM_closure>
<config_GM_closure ocn_grid="EC30to60E2r2">'constant'</config_GM_closure>
<config_GM_closure ocn_grid="WC14to60E2r3">'constant'</config_GM_closure>
Expand Down Expand Up @@ -399,6 +404,7 @@
<config_land_ice_flux_mode ocn_grid="FRISwISC04to60E3r1">'pressure_only'</config_land_ice_flux_mode>
<config_land_ice_flux_mode ocn_grid="FRISwISC02to60E3r1">'pressure_only'</config_land_ice_flux_mode>
<config_land_ice_flux_mode ocn_grid="FRISwISC01to60E3r1">'pressure_only'</config_land_ice_flux_mode>
<config_land_ice_flux_mode ocn_grid="RRSwISC6to18E3r5">'pressure_only'</config_land_ice_flux_mode>
<config_land_ice_flux_formulation>'Jenkins'</config_land_ice_flux_formulation>
<config_land_ice_flux_useHollandJenkinsAdvDiff>.false.</config_land_ice_flux_useHollandJenkinsAdvDiff>
<config_land_ice_flux_attenuation_coefficient>10.0</config_land_ice_flux_attenuation_coefficient>
Expand All @@ -417,6 +423,7 @@
<config_land_ice_flux_explicit_topDragCoeff ocn_grid="FRISwISC04to60E3r1">4.48e-3</config_land_ice_flux_explicit_topDragCoeff>
<config_land_ice_flux_explicit_topDragCoeff ocn_grid="FRISwISC02to60E3r1">4.48e-3</config_land_ice_flux_explicit_topDragCoeff>
<config_land_ice_flux_explicit_topDragCoeff ocn_grid="FRISwISC01to60E3r1">4.48e-3</config_land_ice_flux_explicit_topDragCoeff>
<config_land_ice_flux_explicit_topDragCoeff ocn_grid="RRSwISC6to18E3r5">4.48e-3</config_land_ice_flux_explicit_topDragCoeff>
<config_land_ice_flux_ISOMIP_gammaT>1e-4</config_land_ice_flux_ISOMIP_gammaT>
<config_land_ice_flux_rms_tidal_velocity>5e-2</config_land_ice_flux_rms_tidal_velocity>
<config_land_ice_flux_jenkins_heat_transfer_coefficient>0.011</config_land_ice_flux_jenkins_heat_transfer_coefficient>
Expand All @@ -430,6 +437,7 @@
<config_land_ice_flux_jenkins_heat_transfer_coefficient ocn_grid="FRISwISC04to60E3r1">0.00295</config_land_ice_flux_jenkins_heat_transfer_coefficient>
<config_land_ice_flux_jenkins_heat_transfer_coefficient ocn_grid="FRISwISC02to60E3r1">0.00295</config_land_ice_flux_jenkins_heat_transfer_coefficient>
<config_land_ice_flux_jenkins_heat_transfer_coefficient ocn_grid="FRISwISC01to60E3r1">0.00295</config_land_ice_flux_jenkins_heat_transfer_coefficient>
<config_land_ice_flux_jenkins_heat_transfer_coefficient ocn_grid="RRSwISC6to18E3r5">0.00295</config_land_ice_flux_jenkins_heat_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient>3.1e-4</config_land_ice_flux_jenkins_salt_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="oEC60to30v3wLI">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="ECwISC30to60E1r2">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>
Expand All @@ -441,6 +449,7 @@
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="FRISwISC04to60E3r1">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="FRISwISC02to60E3r1">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="FRISwISC01to60E3r1">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>
<config_land_ice_flux_jenkins_salt_transfer_coefficient ocn_grid="RRSwISC6to18E3r5">8.42e-5</config_land_ice_flux_jenkins_salt_transfer_coefficient>

<!-- advection -->
<config_vert_advection_method>'flux-form'</config_vert_advection_method>
Expand Down Expand Up @@ -469,6 +478,7 @@
<config_implicit_top_drag_coeff ocn_grid="FRISwISC04to60E3r1">4.48e-3</config_implicit_top_drag_coeff>
<config_implicit_top_drag_coeff ocn_grid="FRISwISC02to60E3r1">4.48e-3</config_implicit_top_drag_coeff>
<config_implicit_top_drag_coeff ocn_grid="FRISwISC01to60E3r1">4.48e-3</config_implicit_top_drag_coeff>
<config_implicit_top_drag_coeff ocn_grid="RRSwISC6to18E3r5">4.48e-3</config_implicit_top_drag_coeff>
<config_loglaw_bottom_roughness>1.0e-3</config_loglaw_bottom_roughness>
<config_loglaw_layer_depth_max>10.0</config_loglaw_layer_depth_max>
<config_loglaw_bottom_drag_min>2.5e-3</config_loglaw_bottom_drag_min>
Expand Down Expand Up @@ -555,6 +565,7 @@
<config_btr_dt ocn_grid="FRISwISC04to60E3r1">'0000_00:00:05'</config_btr_dt>
<config_btr_dt ocn_grid="FRISwISC02to60E3r1">'0000_00:00:02.5'</config_btr_dt>
<config_btr_dt ocn_grid="FRISwISC01to60E3r1">'0000_00:00:01.25'</config_btr_dt>
<config_btr_dt ocn_grid="RRSwISC6to18E3r5">'0000_00:00:10'</config_btr_dt>
<config_n_btr_cor_iter>2</config_n_btr_cor_iter>
<config_vel_correction>.true.</config_vel_correction>
<config_btr_subcycle_loop_factor>2</config_btr_subcycle_loop_factor>
Expand Down Expand Up @@ -601,6 +612,7 @@
<config_check_ssh_consistency ocn_grid="FRISwISC04to60E3r1">.false.</config_check_ssh_consistency>
<config_check_ssh_consistency ocn_grid="FRISwISC02to60E3r1">.false.</config_check_ssh_consistency>
<config_check_ssh_consistency ocn_grid="FRISwISC01to60E3r1">.false.</config_check_ssh_consistency>
<config_check_ssh_consistency ocn_grid="RRSwISC6to18E3r5">.false.</config_check_ssh_consistency>
<config_filter_btr_mode>.false.</config_filter_btr_mode>
<config_prescribe_velocity>.false.</config_prescribe_velocity>
<config_prescribe_thickness>.false.</config_prescribe_thickness>
Expand Down Expand Up @@ -1126,6 +1138,7 @@
<config_AM_mocStreamfunction_enable ocn_grid="FRISwISC04to60E3r1">.true.</config_AM_mocStreamfunction_enable>
<config_AM_mocStreamfunction_enable ocn_grid="FRISwISC02to60E3r1">.true.</config_AM_mocStreamfunction_enable>
<config_AM_mocStreamfunction_enable ocn_grid="FRISwISC01to60E3r1">.true.</config_AM_mocStreamfunction_enable>
<config_AM_mocStreamfunction_enable ocn_grid="RRSwISC6to18E3r5">.true.</config_AM_mocStreamfunction_enable>
<config_AM_mocStreamfunction_compute_interval>'0000-00-00_01:00:00'</config_AM_mocStreamfunction_compute_interval>
<config_AM_mocStreamfunction_output_stream>'mocStreamfunctionOutput'</config_AM_mocStreamfunction_output_stream>
<config_AM_mocStreamfunction_compute_on_startup>.true.</config_AM_mocStreamfunction_compute_on_startup>
Expand Down Expand Up @@ -1213,6 +1226,7 @@
<config_AM_conservationCheck_enable ocn_grid="FRISwISC04to60E3r1">.true.</config_AM_conservationCheck_enable>
<config_AM_conservationCheck_enable ocn_grid="FRISwISC02to60E3r1">.true.</config_AM_conservationCheck_enable>
<config_AM_conservationCheck_enable ocn_grid="FRISwISC01to60E3r1">.true.</config_AM_conservationCheck_enable>
<config_AM_conservationCheck_enable ocn_grid="RRSwISC6to18E3r5">.true.</config_AM_conservationCheck_enable>
<config_AM_conservationCheck_compute_interval>'dt'</config_AM_conservationCheck_compute_interval>
<config_AM_conservationCheck_output_stream>'conservationCheckOutput'</config_AM_conservationCheck_output_stream>
<config_AM_conservationCheck_compute_on_startup>.false.</config_AM_conservationCheck_compute_on_startup>
Expand All @@ -1224,6 +1238,7 @@
<config_AM_conservationCheck_compute_on_startup ocn_grid="FRISwISC04to60E3r1">.true.</config_AM_conservationCheck_compute_on_startup>
<config_AM_conservationCheck_compute_on_startup ocn_grid="FRISwISC02to60E3r1">.true.</config_AM_conservationCheck_compute_on_startup>
<config_AM_conservationCheck_compute_on_startup ocn_grid="FRISwISC01to60E3r1">.true.</config_AM_conservationCheck_compute_on_startup>
<config_AM_conservationCheck_compute_on_startup ocn_grid="RRSwISC6to18E3r5">.true.</config_AM_conservationCheck_compute_on_startup>
<config_AM_conservationCheck_write_on_startup>.false.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_on_startup ocn_grid="SOwISC12to60E2r4">.true.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_on_startup ocn_grid="ECwISC30to60E2r1">.true.</config_AM_conservationCheck_write_on_startup>
Expand All @@ -1233,6 +1248,7 @@
<config_AM_conservationCheck_write_on_startup ocn_grid="FRISwISC04to60E3r1">.true.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_on_startup ocn_grid="FRISwISC02to60E3r1">.true.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_on_startup ocn_grid="FRISwISC01to60E3r1">.true.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_on_startup ocn_grid="RRSwISC6to18E3r5">.true.</config_AM_conservationCheck_write_on_startup>
<config_AM_conservationCheck_write_to_logfile>.true.</config_AM_conservationCheck_write_to_logfile>
<config_AM_conservationCheck_restart_stream>'conservationCheckRestart'</config_AM_conservationCheck_restart_stream>

Expand Down
49 changes: 37 additions & 12 deletions components/mpas-ocean/cime_config/buildnml
Original file line number Diff line number Diff line change
Expand Up @@ -365,6 +365,20 @@ def buildnml(case, caseroot, compname):
ic_date = '20240314'
ic_prefix = 'mpaso.IcosXISC30E3r7.rstFromPiControlSpinup-chrysalis'

elif ocn_grid == 'RRSwISC6to18E3r5':
decomp_date = '20240404'
decomp_prefix = 'partitions/mpas-o.graph.info.'
restoring_file = 'sss.PHC2_monthlyClimatology.RRSwISC6to18E3r5.20240327.nc'
analysis_mask_file = 'RRSwISC6to18E3r5_mocBasinsAndTransects20210623.nc'
ic_date = '20240327'
ic_prefix = 'mpaso.RRSwISC6to18E3r5'
if ocn_ic_mode == 'spunup':
logger.warning("WARNING: The specified compset is requesting ocean ICs spunup from a G-case")
logger.warning(" But no file available for this grid.")
if ocn_ismf == 'data':
data_ismf_file = 'prescribed_ismf_paolo2023.RRSwISC6to18E3r5.20240327.nc'


#--------------------------------------------------------------------
# Set OCN_FORCING = datm_forced_restoring if restoring file is available
#--------------------------------------------------------------------
Expand Down Expand Up @@ -491,7 +505,8 @@ def buildnml(case, caseroot, compname):
lines.append('')
lines.append('<immutable_stream name="mesh"')
lines.append(' type="none"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand All @@ -500,7 +515,8 @@ def buildnml(case, caseroot, compname):
lines.append('/>')
lines.append('<immutable_stream name="input"')
lines.append(' type="input"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand All @@ -521,7 +537,8 @@ def buildnml(case, caseroot, compname):
lines.append('-->')
lines.append('<immutable_stream name="restart"')
lines.append(' type="input;output"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand All @@ -540,7 +557,8 @@ def buildnml(case, caseroot, compname):
lines.append('')
lines.append('<stream name="output"')
lines.append(' type="output"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand Down Expand Up @@ -826,7 +844,8 @@ def buildnml(case, caseroot, compname):
lines.append('<stream name="eddyProductVariablesOutput"')
lines.append(' type="output"')
lines.append(' precision="single"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand Down Expand Up @@ -1206,7 +1225,8 @@ def buildnml(case, caseroot, compname):
lines.append('<stream name="timeSeriesStatsMonthlyOutput"')
lines.append(' type="output"')
lines.append(' precision="single"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand Down Expand Up @@ -1252,7 +1272,7 @@ def buildnml(case, caseroot, compname):
lines.append(' <var name="atmosphericPressure"/>')
lines.append(' <var name="normalMLEvelocity"/>')
lines.append(' <var name="vertMLEBolusVelocityTop"/>')
if not ocn_grid.startswith("oRRS1"):
if not (ocn_grid.startswith("oRRS1") or ocn_grid.startswith("RRSwISC6")):
lines.append(' <var name="normalGMBolusVelocity"/>')
lines.append(' <var name="vertGMBolusVelocityTop"/>')
lines.append(' <var name="cGMphaseSpeed"/>')
Expand Down Expand Up @@ -1438,7 +1458,8 @@ def buildnml(case, caseroot, compname):
lines.append('<stream name="timeSeriesStatsMonthlyMaxOutput"')
lines.append(' type="output"')
lines.append(' precision="single"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand Down Expand Up @@ -1502,7 +1523,8 @@ def buildnml(case, caseroot, compname):
lines.append('<stream name="timeSeriesStatsMonthlyMinOutput"')
lines.append(' type="output"')
lines.append(' precision="single"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand Down Expand Up @@ -1607,7 +1629,8 @@ def buildnml(case, caseroot, compname):
lines.append('')
lines.append('<stream name="timeSeriesStatsMonthlyRestart"')
lines.append(' type="input;output"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand All @@ -1623,7 +1646,8 @@ def buildnml(case, caseroot, compname):
lines.append('')
lines.append('<stream name="timeSeriesStatsMonthlyMaxRestart"')
lines.append(' type="input;output"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
Expand All @@ -1639,7 +1663,8 @@ def buildnml(case, caseroot, compname):
lines.append('')
lines.append('<stream name="timeSeriesStatsMonthlyMinRestart"')
lines.append(' type="input;output"')
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS"):
if ocn_grid.startswith("oRRS1") or ocn_grid.startswith("FRIS") \
or ocn_grid.startswith("RRSwISC6"):
lines.append(' io_type="pnetcdf,cdf5"')
else:
lines.append(' io_type="{}"'.format(ocn_pio_typename))
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