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Chandler Haukap edited this page Feb 4, 2020 · 10 revisions

env.in contains input parameters relating to the environment. These parameters affect temperature, temperature growth modifiers, and precipitation. There are also some parameters related to disturbances, specifically disturbances caused by animals.

click here to skip to an example file with values derived from scientific publications

Parameters

STEPWAT2 expects this file to contain six lines of input with each line containing a varying number of parameters separated by at least one space. Any line beginning with a # will be ignored, Meaning you can add unlimited comments to the file. The parameters, in the order that them must appear, are

(average precipitation) (standard deviation of precipitation) (minimum precipitation) (maximum precipitation) (dry year) (wet year) (% precipitation during growing season) (transpiration window)
(average temperature) (standard deviation of temperature) (minimum temperature) (maximum temperature) (base growing temperature)
(Use fecal pats) (probability of pats) (probability that a pat will decompose) (slope for recolonization equation) (intercept for recolonization equation)
(use ant mounts) (probability of mounds) (minimum years before plants can reestablish) (maximum years before plants can reestablish)
(use animal burrows) (probability of burrows) (min years before reestablishment) 
(cool season additive factor) (cool season slope for linear term) (cool season slope for quadratic term) (warm season additive factor) (warm season slope for linear term) (warm season slope for quadratic term)

Precipitation parameters

average precipitation

The average precipitation in millimeters for a single year.

standard deviation of precipitation

The standard deviation in millimeters for a single year.

minimum precipitation

The minimum precipitation in millimeters for a single year.

maximum precipitation

The maximum precipitation in millimeters for a single year.

dry year

A value in millimeters. Any year where total transpiration is less than or equal to this value will be treated as a dry year. See equation 3 in Coffin and Lauenroth 1990.

wet year

A value in millimeters. Any year where total transpiration is greater than or equal to this value will be treated as a wet year. Wet years negatively affect succulents. See equation 4 in Coffin and Lauenroth 1990.

% precipitation during growing season

The percent of precipitation that occurs during the growing season.

transpiration window

STEPWAT2 tracks the average transpiration of plants over a number of years to determine if the current year's transpiration is notably lower than average. If it is, a small amount of additional transpiration is made available to plants. This value controls the size of the transpiration window, meaning the number of past years over which the average is calculated.

Temperature parameters

average temperature

The average temperature, in Celsius, of a single year.

standard deviation of temperature

The standard deviation, in Celsius, of a single year.

minimum temperature

The minimum temperature, in Celsius, of a single year.

maximum temperature

The maximum temperature, in Celsius, of a single year.

base growing temperature

The lowest temperature, in Celsius, at which plants are allowed to grow.

Disturbance parameters

Use fecal pats

Either 0 or 1.

  • 1 will turn on fecal pats.
  • 0 will turn off fecal pats.

probability of pats

The probability (between 0 and 1) that a fecal pat will occur in a single year.

probability that a pat will decompose

The probability that a pat will decompose or be removed in year 1.

slope for recolonization equation

Slope of the equation used to determine time until recolonization. See equation 17 in Coffin and Lauenroth 1990.

intercept for recolonization equation

Intercept of the equation used to determine time until recolonization. See equation 17 in Coffin and Lauenroth 1990.

use ant mounts

Either 0 or 1.

  • 1 will turn on ant mounds.
  • 0 will turn off ant mounts.

probability of mounds

Probability that an ant mound will occur in a single year.

minimum years before plants can reestablish

Minimum years until plants can begin to reestablish.

maximum years before plants can reestablish

Maximum years until plants can begin to reestablish.

use animal burrows

Either 0 or 1.

  • 1 will turn on animal burrows.
  • 0 will turn off animal burrows.

probability of burrows

Probability that an animal burrow will occur in a single year

min years before reestablishment

Minimum number of years before plants can reestablish following an animal burrow disturbance.

Temperature-based growth modifier parameters

cool season additive factor

Cool season additive factor. See equations 12 and 13 in Coffin and Lauenroth 1990.

cool season slope for linear term

Cool season slope for linear term. See equations 12 and 13 in Coffin and Lauenroth 1990.

cool season slope for quadratic term

Cool season slope for quadratic term. See equations 12 and 13 in Coffin and Lauenroth 1990.

warm season additive factor

Warm season additive factor. See equations 12 and 13 in Coffin and Lauenroth 1990.

warm season slope for linear term

Warm season slope for linear term. See equations 12 and 13 in Coffin and Lauenroth 1990.

warm season slope for quadratic term

Warm season slope for quadratic term. See equations 12 and 13 in Coffin and Lauenroth 1990.


Example file

446  79.4     286       714     376      526     .40  30
5.9  1.0     -22        22      4.4
0    .002     .025      0.0975  0.025
0    .00002   20        40
0    .000006  0
2    .1014   -.00257   -11      0.1014  -.00257

References

  • Base growing temperature (4.4) described in Sims et al. 1978 Journal of Ecology
  • All values for fecal pats, ant mounds, and animal burrows come from Coffin and Lauenroth 1990.
  • All values for temperature-based growth modifiers come from Coffin and Lauenroth 1990.
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