[TECH] Notes on version 3.35.3 , docker as tar

Check mail from ch, from 2019-10-01

Instructions:

1. Download the Docker image from BitBucket https://bitbucket.org/aafc-mbb/seqdb/downloads/seqdb_img_3_35.tar
2. Run docker load -i <path-to-image.tar file>
3. verify that the image is there docker images | grep seqdb
4. Download and extract the NRM_Compose: https://bitbucket.org/aafc-mbb/seqdb/downloads/NRM_Compose.tar.xz
5. The archive includes the init SQL Script and the DockerCompose file.
6. Run docker-compose up

Notes on Volumes in the current docker-compose file:

• There is no Volume for Postgres so not data will be persisted
• There is no Volume for seqdb data folder: /var/lib/seqdb in the seqdb image

OBS on restart:

• In the docker-compose file you will see that there is an import-sample-account argument.
• This should only be used on the initial start of the app to add the Admin and User accounts.

in the seqdb-section

# import-sample-accounts: "true"

postgres

1. version => 3.35

2. psql -d seqdb_prod -U postgres

3. SET search_path TO seqdb;

• Once you have the database with persistent storage (you give it a Volume) just remove the argument form the docker-compose (the seqdb-api is more lenient with that but seqdb itself will complaint that Admin already exist).

credentials

see the .env.postgres