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Add image from colored cluster visualized in SnapGene [ci skip]
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althonos committed Jan 11, 2023
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Binary file added docs/_static/img/integrations/snapgene_1.png
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5 changes: 2 additions & 3 deletions docs/integrations.rst
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Expand Up @@ -16,14 +16,13 @@ features. At the moment, GECCO outputs color qualifiers that should be
supported by `APE <https://jorgensen.biology.utah.edu/wayned/ape/>`_,
`EasyFig <https://mjsull.github.io/Easyfig/>`_,
`Benchling <https://benchling.com>`_ or
`SnapGene <https://www.snapgene.com/>`_ as show below:
`SnapGene <https://www.snapgene.com/>`_ as shown below:

.. image:: /_static/img/integrations/snapgene_1.png

The color code is the same as MIBiG, *green* for regulatory proteins, *blue*
for transporters, *red* for biosynthetic proteins, and *grey* for unknown
function protein. In addition, protein that are believed to be non-biosynthetic
(according to the internal GECCO CRF) are labeled in *olive green*.
function protein.

AntiSMASH
^^^^^^^^^
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