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Process the HiCPro results of inter-chromosome matrix, and make it fit to hicPlotter input.

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HicProInterChromosome

Process the HiCPro results of inter-chromosome matrix, and make it fit to hicPlotter input. ####################################################################################

This program is used to process HiCPro results to interact inter-chromosome interactions, and recode to the format that can be used to HiCPlotter.

Usage: Rscript --vanilla HicProResProcess.R theBinBedFile theMatrixFile chr_1 chr_2 
Parameters: 
theBinBedFile, the bin bed file of HiCPro results, 
theMatrixFile, the interaction score matrix file 
chr_1, the first chr id 
chr_2, the second chr id 

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copyright @ Xiaofei Yang, [email protected]

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Process the HiCPro results of inter-chromosome matrix, and make it fit to hicPlotter input.

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