Making Protein folding accessible to all via Google Colab!
- AlphaFold2 - predict single domains, w/ MMseqs2 for MSA generation
- RoseTTAFold - predict single domains
Experimental notebooks:
- AlphaFold2_complexes - predict hetero or homodimers
- AlphaFold2_noTemplates_noMD
- AlphaFold2_noTemplates_yesMD
Acknowledgments
- We would like to thank the RoseTTAFold and AlphaFold team for doing an excellent job open sourcing the software.
- Also credit to David Koes for his awesome py3Dmol plugin, without whom these notebooks would be quite boring!
- A colab by Sergey Ovchinnikov (@sokrypton), Milot Mirdita (@milot_mirdita) and Martin Steinegger (@thesteinegger).