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Error: as(, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead #18

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XuenaXie opened this issue Nov 27, 2022 · 6 comments

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@XuenaXie
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Hi, I am analyzing my data according to the sample code and an error occurs, but the same code did not encounter problems before, how can I solve this error? thanks!!

Evaluating signature scores on cells...

Error: as(, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead

@XuenaXie
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Hello, although there is no previous error when running the code, there seems to be a new error. How can I solve it? Thank you for your help!

Error in [<-.data.frame(*tmp*, , 2, value = 0) :
replacement has 1 row, data has 0
In addition: Warning message:
In readSignaturesInput(signatures) : NAs introduced by coercion

@kangminchao
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Hi, I am analyzing my data according to the sample code and an error occurs, but the same code did not encounter problems before, how can I solve this error? thanks!!

Evaluating signature scores on cells...

Error: as(, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead

How do you fix it?I got into the same erro...

@wang0430
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Hi, I am analyzing my data according to the sample code and an error occurs, but the same code did not encounter problems before, how can I solve this error? thanks!!

Evaluating signature scores on cells...

Error: as(, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead

@paolabc
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paolabc commented Oct 24, 2023

#14

@GUOYF0412
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Hi, I am analyzing my data according to the sample code and an error occurs, but the same code did not encounter problems before, how can I solve this error? thanks!!
Evaluating signature scores on cells...
Error: as(, "dgeMatrix") is deprecated since Matrix 1.5-0; do as(as(as(., "dMatrix"), "generalMatrix"), "unpackedMatrix") instead

How do you fix it?I got into the same erro...

How do you fix it?I got into the same erro...

@GUOYF0412
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#14
it seems not feasible

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5 participants