slight fixes

docs/_config.yml

@@ -3,61 +3,6 @@ description: "Documentation for VRE Hub Zenodo Jupyter Lab Extension"
 remote_theme: pmarsceill/just-the-docs
 color_scheme: dark
 
-# Table of contents
-nav:
-  - title: "Home"
-    url: /
-    nav_order: 1
-
-  - title: "Install"
-    url: /install/
-    nav_order: 2
-    children:
-      - title: "For End-Users"
-        url: /install/#for-end-users-users
-      - title: "For Developers"
-        url: /install/##for-developers-developers
-
-  - title: "Frontend Usage"
-    url: /usage/
-    nav_order: 3
-
-  - title: "Full Documentation"
-    url: /documentation/
-    nav_order: 4
-    children:
-      - title: "Frontend Documentation"
-        url: /documentation/frontend/
-        nav_order: 1
-        children:
-        - title: "General Framework"
-          url: /documentation/frontend/#general-framework
-        - title: "Files in `src/`"
-          url: /documentation/frontend/#files-in-src
-        - title: "`index.tsx`"
-          url: /documentation/frontend/#index
-        - title: "`API/API_functions.tsx`"
-          url: /documentation/frontend/#api_functions
-        - title: "`API/handlers.tsx`"
-          url: /documentation/frontend/#handler
-        - title: "`components/FileBrowser.tsx`"
-          url: /documentation/frontend/#filebrowser
-        - title: "`components/NavBar.tsx`"
-          url: /documentation/frontend/#navbar
-        - title: "`components/SearchPanel.tsx`"
-          url: /documentation/frontend/#searchpanel
-        - title: "`components/SideBarPanel.tsx`"
-          url: /documentation/frontend/#sidebar
-        - title: "`components/confirmation.tsx`"
-          url: /documentation/frontend/#confirmation
-        - title: "`components/login.tsx`"
-          url: /documentation/frontend/#login
-        - title: "`components/upload.tsx`"
-          url: /documentation/frontend/#upload
-      - title: "Backend Documentation"
-        url: /documentation/backend/
-        nav_order: 2
-
 sass:
   load_paths:
     - _sass

docs/documentation/backend.md

@@ -9,11 +9,11 @@ nav_order: 2
 ## General Framework
 The backend for this extension is built as a Jupyter Server Extension. The project entry points are specified with the `pyproject.toml` file in the root directory. These point to the `zenodo_jupyterlab.server` module, which contains the `extenion.py` and `__init__.py` files which run the function that sets up the API handlers defined within other files in that directory. This guide will go through each section, with explanation of functionality.
 
-## Files in `zenodo_jupyterlab/server'
-* ['extension.py`](#extension)
-* ['__init__.py`](#init)
-* ['handlers.py`](#handlers)
-* ['search.py`](#search)
+## Files in `zenodo_jupyterlab/server/`
+* [`extension.py`](#extension)
+* [`__init__.py`](#init)
+* [`handlers.py`](#handlers)
+* [`search.py`](#search)
 * [`testConnection.py`](#testConnection)
 * [`upload.py`](#upload)
 
@@ -161,7 +161,7 @@ Uses `eossr.api.zenodo.ZenodoAPI.create_new_deposit` to create an empty deposit.
 > **Returns:** ID of the newly created record
 
 ### `createMetadata(zAPI: eossr.api.zenodo.ZenodoAPI, recordID: int, form_data: FormData object)`
-*Work in Progress*
+*Work in Progress*\
 Extracts title from form_data and creates a JSON dict as follows:
 ```
 json_metadata = {

docs/documentation/frontend.md

@@ -7,7 +7,7 @@ nav_order: 1
 # Frontend Documentation
 
 ## General Framework {#general-framework}
-The building of the of the frontend JupyterLab extension is handled entirely within `pyproject.toml` in the root directory. The details of that file are discussed [NEED A PLACE TO LINK HERE WHEN I MAKE IT]. All of the frontend components were originally generated with `copier` template of a JupyterLab extension: [template](https://github.com/jupyterlab/extension-template). This extension is built with NodeJS >= 20 with node dependencies contained within `yarn.lock`.
+The building of the of the frontend JupyterLab extension is handled entirely within `pyproject.toml` in the root directory, which was originally generated from the `copier` template. All of the frontend components were originally generated with `copier` template of a JupyterLab extension: [template](https://github.com/jupyterlab/extension-template). This extension is built with NodeJS >= 20 with node dependencies contained within `yarn.lock`.
 
 ## Files in `src/` {#files-in-src}
 * [`index.tsx`](#index)

docs/index.md

@@ -12,8 +12,9 @@ nav_order: 1
 This project integrates [Zenodo](https://zenodo.org) into Jupyter Lab extension.
 
 # Requirements
-JupyterLab > 4, < 5
-Notebook < 7
+JupyterLab > 4, < 5\
+Notebook < 7\
 eOSSR
 
+# Motivation
 This project is being developed as a part of the Virtual Research Environment ([VRE](https://github.com/vre-hub)) initiative, created as a part of the [ESCAPE Collaboration](https://projectescape.eu/). The end goal of the VRE is to develop a Hub which aggregates software and infrastructure to create an end-to-end analysis facility for physicists.

docs/install/index.md

@@ -19,7 +19,7 @@ The following steps require NodeJS >= 20.
 
 Install `yarn`:\
 `npm install -g corepack`\
-`corepack enable`\
+`corepack enable`
 
 Install Python dependecies:\
 `python3 -m pip install -r requirements.txt`