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T010: Update PDB query field URLs
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dominiquesydow committed Sep 2, 2021
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"- Structure has a resolution less or equal to $3.0$\n",
"- Structure has only one chain (for simplicity)\n",
"\n",
"Each structure in the PDB database is linked to many different fields to hold meta information such as our defined criteria. Check out the [complete list of available fields](https://search.rcsb.org/search-attributes.html) and supported operators on the RCSB website. \n",
"Each structure in the PDB database is linked to many different fields to hold meta information such as our defined criteria. Check out the complete list of available fields for [chemicals](https://search.rcsb.org/chemical-search-attributes.html)/[structures](https://search.rcsb.org/structure-search-attributes.html) and supported operators on the RCSB website. \n",
"\n",
"The package `biotite` provides a very nice module `databases.rcsb` (see [docs](https://www.biotite-python.org/apidoc/biotite.database.rcsb.html)), which allows us to query one (`FieldQuery`, see [docs](https://www.biotite-python.org/apidoc/biotite.database.rcsb.FieldQuery.html#biotite.database.rcsb.FieldQuery)) or more (`CompositeQuery`, see [docs](https://www.biotite-python.org/apidoc/biotite.database.rcsb.CompositeQuery.html#biotite.database.rcsb.CompositeQuery)) of these fields to retrieve a count (`count`) or list (`search`) of PDB IDs that match our criteria. \n",
"\n",
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