Release v1.1.0
New release of repository containing data and notebooks for the publication KinFragLib: Exploring the Kinase Inhibitor Space Using Subpocket-Focused Fragmentation and Recombination.
New
- Added GitHub Actions CI running all notebooks with
pytest
(combinatorial dataset is downloaded from zenodo) - Made the former
notebooks/utils.py
scriptpip
-installable askinfraglib
(utility functions can now be used outside ofnotebooks
folder) - Add PR template
- New notebooks:
- Highlight subpocket fragments in ligands based on Greg's blog post:
2_4_highlight_fragments_in_ligand.ipynb
- Show how to generate molecules from the combinatorial library:
4_5_combinatorial_library_construct_ligands.ipynb
- Highlight subpocket fragments in ligands based on Greg's blog post:
Updates
- Changed KLIFS queries from
klifs_utils
toopencadd
(code moved) - Update KLIFS Swagger URL (https://klifs.net/swagger/)
- Update KinFragLib paper citation in README