Conda to uv #1340
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| name: Test Python | |
| on: [push, pull_request] | |
| jobs: | |
| test_python: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| version: ['3.10', '3.12'] | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: astral-sh/setup-uv@v3 | |
| with: | |
| version: "latest" | |
| env: | |
| UV_PYTHON: ${{ matrix.version }} | |
| - name: Install vitessce | |
| run: uv sync --extra dev --extra all | |
| - name: Run tests and report coverage with omits | |
| run: | | |
| uv run coverage run --rcfile .coveragerc_omit --module pytest && \ | |
| uv run coverage report --show-missing --fail-under 100 | |
| - name: Run tests and report coverage without omits | |
| run: | | |
| uv run coverage run --rcfile .coveragerc_real --module pytest && \ | |
| uv run coverage report --show-missing |