Swap installation order of Trixi.jl and LibTrixi.jl #642
Workflow file for this run
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| name: CI | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - 'LICENSE.md' | |
| - 'README.md' | |
| - 'docs/**' | |
| pull_request: | |
| paths-ignore: | |
| - 'LICENSE.md' | |
| - 'README.md' | |
| - 'docs/**' | |
| workflow_dispatch: | |
| inputs: | |
| debug_enabled: | |
| description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)' | |
| required: false | |
| default: "false" | |
| jobs: | |
| test: | |
| name: ${{ matrix.os }} - ${{ matrix.test_type }} - ${{ github.event_name }} | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: | |
| - ubuntu-latest | |
| test_type: | |
| - regular | |
| - coverage | |
| arch: | |
| - x64 | |
| julia_version: | |
| - '1.10' | |
| t8code_version: | |
| - '2.0.0' | |
| include: | |
| - os: ubuntu-latest | |
| test_type: package-compiler | |
| arch: x64 | |
| julia_version: '1.9.3' # 1.9.4: missing nghttp2 symbols in libcurl | |
| t8code_version: '2.0.0' | |
| env: | |
| # Necessary for HDF5 to play nice with Julia | |
| LD_PRELOAD: /lib/x86_64-linux-gnu/libcurl.so.4 | |
| # Necessary such that libtrixi will not use its own default for the depot path | |
| JULIA_DEPOT_PATH: ~/.julia | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - name: Enable Julia cache | |
| uses: julia-actions/cache@v1 | |
| - name: Enable t8code cache | |
| id: cache-t8code | |
| uses: actions/cache@v4 | |
| with: | |
| path: ./t8code-local | |
| key: ${{ matrix.os }}-${{ matrix.arch }}-${{ matrix.t8code_version }} | |
| - name: Install Julia | |
| uses: julia-actions/setup-julia@v2 | |
| with: | |
| version: ${{ matrix.julia_version }} | |
| arch: ${{ matrix.arch }} | |
| - name: Show Julia version information | |
| run: julia -e 'using InteractiveUtils; versioninfo(verbose=true)' | |
| - name: Update `apt-get` | |
| run: sudo apt-get update | |
| - name: Install dependencies available with `apt-get` | |
| # - MPI | |
| # - HDF5 | |
| # - Google Test | |
| # - Coverage (lcov) | |
| run: | | |
| sudo apt-get install -y openmpi-bin libopenmpi-dev \ | |
| libhdf5-openmpi-dev \ | |
| libgtest-dev \ | |
| lcov | |
| - name: Install t8code | |
| if: steps.cache-t8code.outputs.cache-hit != 'true' | |
| run: | | |
| T8CODE_RELEASE=${{ matrix.t8code_version }} | |
| mkdir t8code-local | |
| cd t8code-local | |
| wget https://github.com/DLR-AMR/t8code/releases/download/v${T8CODE_RELEASE}/t8-${T8CODE_RELEASE}.tar.gz | |
| tar xf t8-${T8CODE_RELEASE}.tar.gz | |
| mkdir build | |
| cd build | |
| CC=mpicc CXX=mpicxx ../t8-${T8CODE_RELEASE}/configure \ | |
| --prefix=$PWD/../prefix --enable-mpi | |
| make -j 2 | |
| make install | |
| - name: Configure (test_type == 'regular') | |
| if: ${{ matrix.test_type == 'regular' }} | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DT8CODE_PREFIX=$PWD/../t8code-local/prefix \ | |
| -DENABLE_TESTING=ON -DJULIA_PROJECT_PATH=../libtrixi-julia | |
| - name: Configure (test_type == 'coverage') | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DT8CODE_PREFIX=$PWD/../t8code-local/prefix \ | |
| -DCMAKE_C_FLAGS="-cpp --coverage -O0" \ | |
| -DCMAKE_Fortran_FLAGS="-cpp --coverage -O0" \ | |
| -DCMAKE_EXE_LINKER_FLAGS="--coverage" \ | |
| -DCMAKE_SHARED_LINKER_FLAGS="--coverage" \ | |
| -DENABLE_TESTING=ON -DJULIA_PROJECT_PATH=../libtrixi-julia | |
| - name: Build | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd build | |
| make -j 2 | |
| - name: Install | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd build | |
| make install | |
| - name: Test building with an external Makefile | |
| if: ${{ matrix.test_type == 'regular' }} | |
| run: | | |
| cd examples | |
| make -f MakefileExternal LIBTRIXI_PREFIX=$PWD/../install | |
| - name: Initialize project directory | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| # Note that we set the Julia depot to `~/.julia` *ONLY* to make use of the | |
| # julia-actions/cache above (which unfortunately hardcoded the `~/.julia` | |
| # directory). For this reason, we also need to use `--force` | |
| # Still create subfolder `julia-depot`, which reflects the typical default | |
| # and is tested below | |
| run: | | |
| mkdir libtrixi-julia | |
| cd libtrixi-julia | |
| mkdir julia-depot | |
| ../install/bin/libtrixi-init-julia .. \ | |
| --hdf5-library /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so \ | |
| --t8code-library ../t8code-local/prefix/lib/libt8.so \ | |
| --julia-depot ~/.julia \ | |
| --force | |
| cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_tree1d_dgsem_advection_basic.jl . | |
| cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl . | |
| cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_t8code_2d_dgsem_advection_amr.jl . | |
| - name: Initialize project directory (test_type == 'package-compiler') | |
| if: ${{ matrix.test_type == 'package-compiler' }} | |
| # Note that we set the Julia depot to `~/.julia` *ONLY* to make use of the | |
| # julia-actions/cache above (which unfortunately hardcoded the `~/.julia` | |
| # directory). For this reason, we also need to use `--force` | |
| # Still create subfolder `julia-depot`, which reflects the typical default | |
| # and is tested below | |
| run: | | |
| mkdir libtrixi-julia | |
| cd libtrixi-julia | |
| mkdir julia-depot | |
| ../utils/libtrixi-init-julia .. \ | |
| --hdf5-library /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so \ | |
| --t8code-library ../t8code-local/prefix/lib/libt8.so \ | |
| --julia-depot ~/.julia \ | |
| --force | |
| - name: Configure (test_type == 'package-compiler') | |
| if: ${{ matrix.test_type == 'package-compiler' }} | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DUSE_PACKAGE_COMPILER=ON \ | |
| -DJULIA_PROJECT_PATH=$PWD/../libtrixi-julia | |
| - name: Build (test_type == 'package-compiler') | |
| if: ${{ matrix.test_type == 'package-compiler' }} | |
| run: | | |
| cd build | |
| make -j2 | |
| - name: Test external CMake project | |
| if: ${{ matrix.test_type == 'regular' }} | |
| run: | | |
| cd examples/external | |
| ./build.sh | |
| mpirun -n 2 ./build/trixi_controller_simple_c \ | |
| ../../libtrixi-julia \ | |
| ../../LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| - name: Prepare coverage reporting | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| run: | | |
| cd libtrixi-julia | |
| lcov --directory ../build --zerocounters | |
| - name: Run Julia tests | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| uses: julia-actions/julia-runtest@v1 | |
| with: | |
| coverage: ${{ matrix.test_type == 'coverage' }} | |
| project: ./LibTrixi.jl | |
| check_bounds: 'auto' | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| LD_PRELOAD: "" # Disable preloading libcurl.so since it does not work with the JLL-provided libhdf5.so | |
| - name: Run examples | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd libtrixi-julia | |
| ../build/examples/trixi_controller_simple_c . libelixir_tree1d_dgsem_advection_basic.jl | |
| ../build/examples/trixi_controller_simple_f . libelixir_tree1d_dgsem_advection_basic.jl | |
| ../build/examples/trixi_controller_simple_c . libelixir_p4est2d_dgsem_euler_sedov.jl | |
| ../build/examples/trixi_controller_simple_f . libelixir_p4est2d_dgsem_euler_sedov.jl | |
| ../build/examples/trixi_controller_data_c . libelixir_t8code_2d_dgsem_advection_amr.jl | |
| ../build/examples/trixi_controller_data_f . libelixir_t8code_2d_dgsem_advection_amr.jl | |
| ../build/examples/trixi_controller_t8code_c . libelixir_t8code_2d_dgsem_advection_amr.jl | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| - name: Run examples (test_type == 'package-compiler') | |
| if: ${{ matrix.test_type == 'package-compiler' }} | |
| run: | | |
| cd build/examples | |
| mpirun -n 2 trixi_controller_simple_c \ | |
| ../../libtrixi-julia \ | |
| ../../LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| - name: Check error handling of examples | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd libtrixi-julia | |
| set +e # disable early exit on non-zero exit code | |
| for command in "../build/examples/trixi_controller_simple_c" \ | |
| "../build/examples/trixi_controller_simple_c ." \ | |
| "../build/examples/trixi_controller_simple_f" \ | |
| "../build/examples/trixi_controller_simple_f ." \ | |
| "../build/examples/trixi_controller_data_c" \ | |
| "../build/examples/trixi_controller_data_c ." \ | |
| "../build/examples/trixi_controller_data_f" \ | |
| "../build/examples/trixi_controller_data_f ." \ | |
| "../build/examples/trixi_controller_t8code_c" \ | |
| "../build/examples/trixi_controller_t8code_c ." | |
| do | |
| $command | |
| if [ $? -ne 2 ]; then | |
| echo "Wrong exit code for $command! Expected 2, got $?" | |
| exit 1 | |
| fi | |
| done | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| - name: Run C tests | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd build/test/c | |
| ctest -V | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| GTEST_COLOR: 'yes' | |
| - name: Run Fortran tests | |
| if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
| run: | | |
| cd build/test/fortran | |
| ctest -V | |
| env: | |
| LIBTRIXI_DEBUG: all | |
| - name: Process Julia coverage data | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| uses: julia-actions/julia-processcoverage@v1 | |
| with: | |
| directories: LibTrixi.jl/src | |
| - name: Process C/Fortran coverage data | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| run: | | |
| cd libtrixi-julia | |
| lcov --directory ../build --capture \ | |
| --exclude "*/julia.h" --exclude "*test-drive-src*" --exclude "*/test/*" \ | |
| --output-file lcov.info | |
| - name: Upload coverage data (Codecov) | |
| uses: codecov/codecov-action@v4 | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| with: | |
| files: ./libtrixi-julia/lcov.info,./lcov.info | |
| flags: unittests | |
| name: codecov-umbrella | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| - name: Upload coverage data (Coveralls) | |
| if: ${{ matrix.test_type == 'coverage' }} | |
| uses: coverallsapp/github-action@main | |
| with: | |
| github-token: ${{ secrets.GITHUB_TOKEN }} | |
| files: ./libtrixi-julia/lcov.info ./lcov.info | |
| # Enable tmate debugging of manually-triggered workflows if the input option was provided | |
| - name: Setup tmate session for debugging | |
| if: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.debug_enabled && always() }} | |
| uses: mxschmitt/action-tmate@v3 | |
| timeout-minutes: 15 |