Bump crate-ci/typos from 1.28.3 to 1.28.4 #772
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- main | |
paths-ignore: | |
- 'LICENSE.md' | |
- 'README.md' | |
- 'docs/**' | |
pull_request: | |
paths-ignore: | |
- 'LICENSE.md' | |
- 'README.md' | |
- 'docs/**' | |
workflow_dispatch: | |
inputs: | |
debug_enabled: | |
description: 'Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)' | |
required: false | |
default: "false" | |
jobs: | |
test: | |
name: ${{ matrix.os }} - ${{ matrix.test_type }} - Julia ${{ matrix.julia_version }} - ${{ github.event_name }} | |
runs-on: ${{ matrix.os }} | |
strategy: | |
fail-fast: false | |
matrix: | |
os: | |
- ubuntu-latest | |
test_type: | |
- regular | |
- package-compiler | |
arch: | |
- x64 | |
julia_version: | |
- '1.10' | |
- '1.11' | |
t8code_version: | |
- '3.0.0' | |
include: | |
- os: ubuntu-latest | |
test_type: coverage | |
arch: x64 | |
julia_version: '1.11' | |
t8code_version: '3.0.0' | |
env: | |
# Necessary for HDF5 to play nice with Julia | |
LD_PRELOAD: /lib/x86_64-linux-gnu/libcurl.so.4 | |
# Necessary such that libtrixi will not use its own default for the depot path | |
JULIA_DEPOT_PATH: ~/.julia | |
steps: | |
- name: Checkout repository | |
uses: actions/checkout@v4 | |
- name: Enable Julia cache | |
uses: julia-actions/cache@v2 | |
- name: Enable t8code cache | |
id: cache-t8code | |
uses: actions/cache@v4 | |
with: | |
path: ./t8code-local | |
key: ${{ matrix.os }}-${{ matrix.arch }}-${{ matrix.t8code_version }} | |
- name: Install Julia | |
uses: julia-actions/setup-julia@v2 | |
with: | |
version: ${{ matrix.julia_version }} | |
arch: ${{ matrix.arch }} | |
- name: Show Julia version information | |
run: julia -e 'using InteractiveUtils; versioninfo(verbose=true)' | |
- name: Update `apt-get` | |
run: sudo apt-get update | |
- name: Install dependencies available with `apt-get` | |
# - MPI | |
# - HDF5 | |
# - Google Test | |
# - Coverage (lcov) | |
run: | | |
sudo apt-get install -y openmpi-bin libopenmpi-dev \ | |
libhdf5-openmpi-dev \ | |
libgtest-dev \ | |
lcov | |
- name: Install t8code | |
if: steps.cache-t8code.outputs.cache-hit != 'true' | |
run: | | |
T8CODE_RELEASE=${{ matrix.t8code_version }} | |
mkdir t8code-local | |
cd t8code-local | |
wget https://github.com/DLR-AMR/t8code/releases/download/v${T8CODE_RELEASE}/T8CODE-${T8CODE_RELEASE}-Source.tar.gz | |
tar xf T8CODE-${T8CODE_RELEASE}-Source.tar.gz | |
mkdir build | |
cd build | |
cmake \ | |
-DCMAKE_C_COMPILER=mpicc \ | |
-DCMAKE_CXX_COMPILER=mpicxx \ | |
-DCMAKE_BUILD_TYPE=Release \ | |
-DCMAKE_INSTALL_PREFIX="$PWD/../prefix" \ | |
-DT8CODE_BUILD_TESTS=OFF \ | |
-DT8CODE_BUILD_TUTORIALS=OFF \ | |
-DT8CODE_BUILD_EXAMPLES=OFF \ | |
-DT8CODE_BUILD_BENCHMARKS=OFF \ | |
-DT8CODE_ENABLE_MPI=ON \ | |
-DT8CODE_BUILD_FORTRAN_INTERFACE=ON \ | |
../T8CODE-${T8CODE_RELEASE}-Source | |
make -j 2 | |
make install | |
- name: Configure (test_type == 'regular') | |
if: ${{ matrix.test_type == 'regular' }} | |
run: | | |
mkdir build | |
cd build | |
cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
-DCMAKE_BUILD_TYPE=Release \ | |
-DT8CODE_ROOT=$PWD/../t8code-local/prefix \ | |
-DENABLE_TESTING=ON -DJULIA_PROJECT_PATH=../libtrixi-julia | |
- name: Configure (test_type == 'coverage') | |
if: ${{ matrix.test_type == 'coverage' }} | |
run: | | |
mkdir build | |
cd build | |
cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
-DCMAKE_BUILD_TYPE=Debug \ | |
-DT8CODE_ROOT=$PWD/../t8code-local/prefix \ | |
-DCMAKE_C_FLAGS="-cpp --coverage -O0" \ | |
-DCMAKE_Fortran_FLAGS="-cpp --coverage -O0" \ | |
-DCMAKE_EXE_LINKER_FLAGS="--coverage" \ | |
-DCMAKE_SHARED_LINKER_FLAGS="--coverage" \ | |
-DENABLE_TESTING=ON -DJULIA_PROJECT_PATH=../libtrixi-julia | |
- name: Build | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd build | |
make -j 2 | |
- name: Install | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd build | |
make install | |
- name: Test building with an external Makefile | |
if: ${{ matrix.test_type == 'regular' }} | |
run: | | |
cd examples | |
make -f MakefileExternal LIBTRIXI_PREFIX=$PWD/../install | |
- name: Initialize project directory | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
# Note that we set the Julia depot to `~/.julia` *ONLY* to make use of the | |
# julia-actions/cache above (which unfortunately hardcoded the `~/.julia` | |
# directory). For this reason, we also need to use `--force` | |
# Still create subfolder `julia-depot`, which reflects the typical default | |
# and is tested below | |
run: | | |
mkdir libtrixi-julia | |
cd libtrixi-julia | |
mkdir julia-depot | |
../install/bin/libtrixi-init-julia .. \ | |
--hdf5-library /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so \ | |
--t8code-library ../t8code-local/prefix/lib/libt8.so \ | |
--julia-depot ~/.julia \ | |
--force | |
cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_tree1d_dgsem_advection_basic.jl . | |
cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl . | |
cp ../install/share/libtrixi/LibTrixi.jl/examples/libelixir_t8code_2d_dgsem_advection_amr.jl . | |
- name: Initialize project directory (test_type == 'package-compiler') | |
if: ${{ matrix.test_type == 'package-compiler' }} | |
# Note that we set the Julia depot to `~/.julia` *ONLY* to make use of the | |
# julia-actions/cache above (which unfortunately hardcoded the `~/.julia` | |
# directory). For this reason, we also need to use `--force` | |
# Still create subfolder `julia-depot`, which reflects the typical default | |
# and is tested below | |
run: | | |
mkdir libtrixi-julia | |
cd libtrixi-julia | |
mkdir julia-depot | |
../utils/libtrixi-init-julia .. \ | |
--hdf5-library /usr/lib/x86_64-linux-gnu/hdf5/openmpi/libhdf5.so \ | |
--t8code-library ../t8code-local/prefix/lib/libt8.so \ | |
--julia-depot ~/.julia \ | |
--force | |
- name: Configure (test_type == 'package-compiler') | |
if: ${{ matrix.test_type == 'package-compiler' }} | |
run: | | |
mkdir build | |
cd build | |
cmake .. -DCMAKE_INSTALL_PREFIX=../install \ | |
-DCMAKE_BUILD_TYPE=Debug \ | |
-DUSE_PACKAGE_COMPILER=ON \ | |
-DJULIA_PROJECT_PATH=$PWD/../libtrixi-julia | |
- name: Build (test_type == 'package-compiler') | |
if: ${{ matrix.test_type == 'package-compiler' }} | |
run: | | |
cd build | |
make -j2 | |
du -hL ./prefix-pc/lib/libtrixi.so | |
- name: Test external CMake project | |
if: ${{ matrix.test_type == 'regular' }} | |
run: | | |
cd examples/external | |
./build.sh | |
mpirun -n 2 ./build/trixi_controller_simple_c \ | |
../../libtrixi-julia \ | |
../../LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl | |
env: | |
LIBTRIXI_DEBUG: all | |
- name: Prepare coverage reporting | |
if: ${{ matrix.test_type == 'coverage' }} | |
run: | | |
cd libtrixi-julia | |
lcov --directory ../build --zerocounters | |
- name: Run Julia tests | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
uses: julia-actions/julia-runtest@v1 | |
with: | |
coverage: ${{ matrix.test_type == 'coverage' }} | |
project: ./LibTrixi.jl | |
check_bounds: 'auto' | |
env: | |
LIBTRIXI_DEBUG: all | |
LD_PRELOAD: "" # Disable preloading libcurl.so since it does not work with the JLL-provided libhdf5.so | |
- name: Run examples | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd libtrixi-julia | |
../build/examples/trixi_controller_simple_c . libelixir_tree1d_dgsem_advection_basic.jl | |
../build/examples/trixi_controller_simple_f . libelixir_tree1d_dgsem_advection_basic.jl | |
../build/examples/trixi_controller_simple_c . libelixir_p4est2d_dgsem_euler_sedov.jl | |
../build/examples/trixi_controller_simple_f . libelixir_p4est2d_dgsem_euler_sedov.jl | |
../build/examples/trixi_controller_data_c . libelixir_t8code_2d_dgsem_advection_amr.jl | |
../build/examples/trixi_controller_data_f . libelixir_t8code_2d_dgsem_advection_amr.jl | |
../build/examples/trixi_controller_t8code_c . libelixir_t8code_2d_dgsem_advection_amr.jl | |
../build/examples/trixi_controller_t8code_f . libelixir_t8code_2d_dgsem_advection_amr.jl | |
env: | |
LIBTRIXI_DEBUG: all | |
- name: Run examples (test_type == 'package-compiler') | |
if: ${{ matrix.test_type == 'package-compiler' }} | |
run: | | |
cd build/examples | |
mpirun -n 2 trixi_controller_simple_c \ | |
../../libtrixi-julia \ | |
../../LibTrixi.jl/examples/libelixir_p4est2d_dgsem_euler_sedov.jl | |
env: | |
LIBTRIXI_DEBUG: all | |
- name: Check error handling of examples | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd libtrixi-julia | |
set +e # disable early exit on non-zero exit code | |
for command in "../build/examples/trixi_controller_simple_c" \ | |
"../build/examples/trixi_controller_simple_c ." \ | |
"../build/examples/trixi_controller_simple_f" \ | |
"../build/examples/trixi_controller_simple_f ." \ | |
"../build/examples/trixi_controller_data_c" \ | |
"../build/examples/trixi_controller_data_c ." \ | |
"../build/examples/trixi_controller_data_f" \ | |
"../build/examples/trixi_controller_data_f ." \ | |
"../build/examples/trixi_controller_t8code_c" \ | |
"../build/examples/trixi_controller_t8code_c ." \ | |
"../build/examples/trixi_controller_t8code_f" \ | |
"../build/examples/trixi_controller_t8code_f ." | |
do | |
$command | |
if [ $? -ne 2 ]; then | |
echo "Wrong exit code for $command! Expected 2, got $?" | |
exit 1 | |
fi | |
done | |
env: | |
LIBTRIXI_DEBUG: all | |
- name: Run C tests | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd build/test/c | |
ctest -V | |
env: | |
LIBTRIXI_DEBUG: all | |
GTEST_COLOR: 'yes' | |
- name: Run Fortran tests | |
if: ${{ matrix.test_type == 'regular' || matrix.test_type == 'coverage' }} | |
run: | | |
cd build/test/fortran | |
ctest -V | |
env: | |
LIBTRIXI_DEBUG: all | |
- name: Process Julia coverage data | |
if: ${{ matrix.test_type == 'coverage' }} | |
uses: julia-actions/julia-processcoverage@v1 | |
with: | |
directories: LibTrixi.jl/src | |
- name: Process C/Fortran coverage data | |
if: ${{ matrix.test_type == 'coverage' }} | |
run: | | |
cd libtrixi-julia | |
lcov --directory ../build --capture \ | |
--exclude "*/julia.h" --exclude "*test-drive-src*" --exclude "*/test/*" \ | |
--output-file lcov.info | |
- name: Upload coverage data (Codecov) | |
uses: codecov/codecov-action@v5 | |
if: ${{ matrix.test_type == 'coverage' }} | |
with: | |
files: ./libtrixi-julia/lcov.info,./lcov.info | |
flags: unittests | |
name: codecov-umbrella | |
token: ${{ secrets.CODECOV_TOKEN }} | |
- name: Upload coverage data (Coveralls) | |
if: ${{ matrix.test_type == 'coverage' }} | |
uses: coverallsapp/github-action@main | |
with: | |
github-token: ${{ secrets.GITHUB_TOKEN }} | |
files: ./libtrixi-julia/lcov.info ./lcov.info | |
# Enable tmate debugging of manually-triggered workflows if the input option was provided | |
- name: Setup tmate session for debugging | |
if: ${{ github.event_name == 'workflow_dispatch' && github.event.inputs.debug_enabled && always() }} | |
uses: mxschmitt/action-tmate@v3 | |
timeout-minutes: 15 |