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msa-construction

Here are 2 public repositories matching this topic...

ml4bio / Dense-Homolog-Retrieval

Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval

protein homology-search protein-structure-prediction alphafold dense-retrieval protein-language-model msa-construction

Updated Aug 30, 2024
Python

elttaes / Revisiting-PLMs

Exploring Evolution-aware & free protein language models as protein function predictors

benchmark pytorch contact-prediction stability multiple-sequence-alignment protein-annotation function-prediction protein-classification alphafold protein-language-model alphafold2 fitness-prediction zero-shot-prediction msa-construction msa-transformer esm1b remote-homology-detection metal-ion-binding

Updated Sep 28, 2024
Python

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