added collect to RUN_MULTIQC_FC in FEATURECOUNTS_BAM to generate a si…

…ngle report
tansey-lab · Jul 25, 2024 · e5fd61c · e5fd61c
1 parent 7fa92d7
commit e5fd61c
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/nextflow/main.nf b/nextflow/main.nf
@@ -186,7 +186,9 @@ workflow FEATURECOUNTS_BAM {
 
     RUN_MULTIQC_FC (
         "featureCounts",
-        SUBREAD_FEATURECOUNTS.out.summary.map { it -> it[1] }
+        SUBREAD_FEATURECOUNTS.out.summary
+            .map { it -> it[1] }
+            .collect()
     )
 }