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updated readme
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@stevemussmann
stevemussmann committed Dec 3, 2018
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Expand Up @@ -53,6 +53,8 @@ Plink optional arguments:

VCFtools optional arguments:
* **-t / --thin:** Filter loci by thinning out any loci falling within the specified proximity to one another, measured in basepairs. (default = off, specify an integer greater than 0 to turn it on).
* **-C / --indcov:** Filter samples based on maximum allowable missing data. Feature added by @tkchafin. (default = 0.9, input = float).
* **-S / --snpcov:** Filter SNPs based on maximum allowable missing data. Feature added by @tkchafin. (default = 0.9, input = float).

## Example:

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