Package suggested but not available: ‘rhdf5’

Package suggested but not available: ‘rhdf5’

R CMD check found ERRORs

Process completed with exit code 1.

No such keg: /opt/homebrew/Cellar/[email protected]

Process completed with exit code 1.

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

Your workflow is using a version of actions/cache that is scheduled for deprecation, actions/cache@v2. Please update your workflow to use the latest version of actions/cache to avoid interruptions. Learn more: https://github.blog/changelog/2024-09-16-notice-of-upcoming-deprecations-and-changes-in-github-actions-services/

pkgconf 2.3.0_1 is already installed and up-to-date. To reinstall 2.3.0_1, run: brew reinstall pkgconf

HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!

Found the following significant warnings:

Missing link or links in Rd file 'fillChromPeaks.Rd':

Undocumented code objects:

Undocumented arguments in Rd file 'XcmsExperimentHdf5.Rd'

Output for data("xdata", package = "xcms"):

See below...

Missing link or links in Rd file 'fillChromPeaks.Rd':

Undocumented code objects:

Undocumented arguments in Rd file 'XcmsExperimentHdf5.Rd'