Update README.md

README.md

@@ -4,10 +4,10 @@ Scripts used for analysis of data in manuscript under revision at Nature Communi
 
 # Scripts description
 
-seurat_v1.R - initialize seurat object from 10X Genomics cellranger outputs. Includes filtering, normalization, regression, variable gene identification, PCA analysis, clustering, tSNE visualization. Used for v1 datasets. <br />
-seurat_v2.R - initialize seurat object from 10X Genomics cellranger outputs. Includes filtering, normalization, regression, variable gene identification, PCA analysis. Used for v2 datasets. <br />
-clustering_markers_v2.R - clustering and tSNE visualization for v2 datasets. <br />
-seurat_object_analysis_v1_and_v2.R - downstream analysis for seurat object created by seurat_v1.R or seurat_v2.R. <br />
-merge_clusters.R - merge clusters that do not meet gene threshold. Used for both v1 and b2 datasets. <br />
-monocle_v1_seurat_input.R - monocle script using seurat batch corrected values as input for v1 merged timecourse datasets. <br />
-monocle_object_analysis.R - downstream analysis for monocle object - BEAM and plotting. <br />
+seurat_v1.R - initialize seurat object from 10X Genomics cellranger outputs. Includes filtering, normalization, regression, variable gene identification, PCA analysis, clustering, tSNE visualization. Used for v1 datasets. <br /> <br />
+seurat_v2.R - initialize seurat object from 10X Genomics cellranger outputs. Includes filtering, normalization, regression, variable gene identification, and PCA analysis. Used for v2 datasets. <br /><br />
+clustering_markers_v2.R - clustering and tSNE visualization for v2 datasets. <br /><br />
+seurat_object_analysis_v1_and_v2.R - downstream analysis and plotting functions for seurat object created by seurat_v1.R or seurat_v2.R. <br /><br />
+merge_clusters.R - merge clusters that do not meet gene threshold. Used for both v1 and v2 datasets. <br /><br />
+monocle_v1_seurat_input.R - monocle script using seurat batch corrected values as input for v1 merged timecourse datasets. <br /><br />
+monocle_object_analysis.R - downstream analysis for monocle object - BEAM and plotting. <br /><br />