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@sifrproject

sifrproject

Semantic Indexing of French Biomedical Data Resources (SIFR) project. Research project funded by ANR, Univ. of Montpellier, CNRS and IBC

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  1. biotex biotex Public

    Biotex application (automatic extraction of biomedical terms)

    Java 4 5

  2. bioportal_web_ui bioportal_web_ui Public archive

    Forked from ontoportal/ontoportal_web_ui

    A rails application for biological ontologies, (originally from http://bioportal.bioontology.org). But reused in two project at LIRMM.

    Ruby 4

  3. viewpoints_kernel viewpoints_kernel Public

    This is the Kernel module of the ViewpointS API, an awesome java Subjective Knowledge Representation API based one the ViewpointS formalism

    Java 2

  4. viewpoints_io viewpoints_io Public

    This is the ViewpointS import/export module. It index web data, it allow to exchange viewpoints data in xml format, it manage the persistence thanks to Neo4J.

    Java 1

  5. umls2rdf umls2rdf Public

    Forked from ncbo/umls2rdf

    These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    Python 1 1

  6. purl_servlet purl_servlet Public

    A simple servlet to resolve purl.lirmm.fr URIs

    Java 1

Repositories

Showing 10 of 21 repositories
  • UMLS-Types-assignor Public

    Machine Learning model that learns from Unified Medical Language System Metathesaurus (UMLS Metathesaurus) database tagging new graph in Semantic Network

    sifrproject/UMLS-Types-assignor’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Jul 28, 2022
  • bioportal_web_ui Public archive Forked from ontoportal/ontoportal_web_ui

    A rails application for biological ontologies, (originally from http://bioportal.bioontology.org). But reused in two project at LIRMM.

    sifrproject/bioportal_web_ui’s past year of commit activity
    Ruby 4 31 0 0 Updated Nov 2, 2020
  • docker-compose-bioportal Public Forked from silviodc/docker-compose-bioportal

    A Docker compose to have a fully working BioPortal development environment

    sifrproject/docker-compose-bioportal’s past year of commit activity
    XSLT 1 8 0 0 Updated Jan 20, 2019
  • cladimed2skos Public

    SKOS version of CLADIMED

    sifrproject/cladimed2skos’s past year of commit activity
    Java 0 0 2 (1 issue needs help) 0 Updated Feb 14, 2018
  • biotex Public

    Biotex application (automatic extraction of biomedical terms)

    sifrproject/biotex’s past year of commit activity
    Java 4 5 0 0 Updated Dec 8, 2017
  • UnitexRecognizer Public

    Workflow to use Unitex with the SIFR Annotator

    sifrproject/UnitexRecognizer’s past year of commit activity
    C++ 0 0 0 0 Updated Dec 1, 2017
  • paradise_extractor Public
    sifrproject/paradise_extractor’s past year of commit activity
    Shell 0 0 0 0 Updated Jul 27, 2017
  • sifr_project_java_ontology_processing Public

    Java Scripts to process Ontologies using OWLAPI for the SIFR project

    sifrproject/sifr_project_java_ontology_processing’s past year of commit activity
    Java 0 0 3 0 Updated Jul 17, 2017
  • Heuristics Public
    sifrproject/Heuristics’s past year of commit activity
    Java 0 0 0 0 Updated Apr 6, 2017
  • umls2rdf Public Forked from ncbo/umls2rdf

    These python scripts connect to the Unified Medical Language System (UMLS) database and translate the ontologies into RDF/OWL files. This is part of the BioPortal project.

    sifrproject/umls2rdf’s past year of commit activity
    Python 1 37 0 0 Updated Apr 5, 2017
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