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Add precompiled/test data
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@hongduosun
hongduosun committed Mar 30, 2018
1 parent d739a58 commit b9f7a92
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10 changes: 10 additions & 0 deletions data/example/motif_list_demo.txt
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Pou5f1
SOX10
ARID3A
Prrx2
Sox5
NFIC
Sox2
POU2F2
TEAD1
Sox3
10 changes: 10 additions & 0 deletions data/example/motif_pfm_demo.txt
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>MA0528.1 ZNF263
2366 4596 11118 453 1011 13919 1569 1552 8113 5132 3096 6598 4175 4106 7943 3823 3132 8305 5226 4067 7264
293 0 0 0 1738 551 844 1427 968 1543 1069 590 620 1618 950 1 0 0 219 650 907
11078 10639 2802 13819 12444 43 11252 11451 5513 7042 9471 6730 8903 9042 4780 9659 11444 5892 8923 9819 6141
1498 0 1315 963 42 722 1570 805 641 1518 1599 1317 1537 469 1562 1752 659 1038 867 699 923
>MA0142.1 Pou5f1::Sox2
63 579 11 47 118 415 206 1235 17 10 14 1050 887 1200 198
846 58 50 12 363 18 365 30 5 16 1029 16 68 33 119
66 28 36 79 825 29 186 24 15 1239 129 30 315 75 207
389 701 1270 1231 63 907 612 80 1332 104 196 269 92 53 837
30 changes: 30 additions & 0 deletions data/example/motif_table_demo.txt
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>MA0036.2 GATA2 max_score:11.9881663081 score_cutoff:0.699571528887
0.358219178082 0.256849315068 0.35502283105 0.2399543379 0.00730593607306 0.00205479452055 0.001 0.0116205479452 0.997 0.001 0.001 0.279121004566 0.0237442922374 0.286757990868
0.129452054795 0.175342465753 0.166438356164 0.119863013699 0.241324200913 0.688356164384 0.0437479452055 0.001 0.001 0.001 0.997 0.001 0.40296803653 0.270547945205
0.172146118721 0.390182648402 0.278538812785 0.0974885844749 0.174657534247 0.208675799087 0.001 0.001 0.001 0.001 0.001 0.001 0.449086757991 0.0511415525114
0.340182648402 0.177625570776 0.2 0.542694063927 0.576712328767 0.100913242009 0.954252054795 0.986379452055 0.001 0.997 0.001 0.718878995434 0.124200913242 0.391552511416
>MA0599.1 KLF5 max_score:12.7441695085 score_cutoff:0.834064484719
0.104988612152 0.001 0.001 0.255199691426 0.001 0.370725810007 0.001 0.001 0.001 0.287347366101
0.148629784733 0.872544265667 0.880463154801 0.702331276174 0.997 0.001 0.997 0.997 0.963098229373 0.410653515539
0.556314745426 0.001 0.001 0.001 0.001 0.380340753802 0.001 0.001 0.001 0.001
0.190066857689 0.125455734333 0.117536845199 0.0414690324003 0.001 0.247933436191 0.001 0.001 0.0349017706267 0.30099911836
>MA0037.2 GATA3 max_score:9.64418393139 score_cutoff:0.895897957793
0.997 0.001 0.997 0.001 0.997 0.997 0.278180639585 0.603544511668
0.001 0.001 0.001 0.001 0.001 0.001 0.001 0.153692307692
0.001 0.997 0.001 0.001 0.001 0.001 0.719819360415 0.24176318064
0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001
>MA0528.1 ZNF263 max_score:21.8690983625 score_cutoff:0.64368883251
0.155300295372 0.301070429931 0.729037216935 0.0297044305875 0.066360354447 0.913619954053 0.102986544142 0.101870692484 0.532523793896 0.33685592386 0.203216278307 0.433081719724 0.274040039383 0.269510994421 0.521365277322 0.250935346242 0.205373679029 0.544581227437 0.343025927141 0.266951099442 0.47679684936
0.0192320315064 0.001 0.001 0.001 0.114079422383 0.0361667213653 0.0553987528717 0.0936659008861 0.0635379061372 0.101279947489 0.0701673777486 0.0387266163439 0.0406957663275 0.106202822448 0.062356416147 6.56383327863e-05 0.001 0.001 0.0143747948802 0.0426649163111 0.0595339678372
0.727141450607 0.696929570069 0.183734689859 0.906149064654 0.816803413193 0.00282244830981 0.738562520512 0.751624548736 0.361864128651 0.462225139481 0.621660649819 0.441745979652 0.584378076797 0.593501805054 0.313751230719 0.634000656383 0.750413915327 0.38635431572 0.585690843453 0.644502789629 0.403085001641
0.0983262225139 0.001 0.0862280932064 0.0631465047588 0.00275680997703 0.0473908762717 0.103052182475 0.052838857893 0.042074171316 0.0996389891697 0.104955694125 0.0864456842796 0.100886117493 0.0307843780768 0.102527075812 0.114998359042 0.0432124056449 0.0680644568428 0.0569084345258 0.0458811946177 0.0605841811618
>MA0142.1 Pou5f1::Sox2 max_score:14.8986907636 score_cutoff:0.532447430965
0.0461876832845 0.423865300146 0.00804681784931 0.0343316289262 0.0861943024105 0.303140978817 0.150474799123 0.902118334551 0.0124178232286 0.0073046018992 0.0102339181287 0.769230769231 0.651248164464 0.881704628949 0.145481263777
0.620234604106 0.0424597364568 0.0365764447696 0.00876552227904 0.265157048941 0.0131482834186 0.266617969321 0.0219138056976 0.0036523009496 0.0116873630387 0.752192982456 0.0117216117216 0.0499265785609 0.0242468772961 0.0874357090375
0.0483870967742 0.0204978038067 0.0263350402341 0.0577063550037 0.602629656684 0.0211833455077 0.135865595325 0.0175310445581 0.0109569028488 0.90504017531 0.094298245614 0.021978021978 0.23127753304 0.0551065393093 0.152094048494
0.285190615836 0.51317715959 0.929041697147 0.899196493791 0.0460189919649 0.662527392257 0.447041636231 0.0584368151936 0.972972972973 0.0759678597516 0.143274853801 0.19706959707 0.0675477239354 0.0389419544453 0.614988978692
>MA0028.1 ELK1 max_score:9.91143312858 score_cutoff:0.702881193109
0.25 0.357142857143 0.321428571429 0.178571428571 0.0714285714286 0.001 0.0356428571429 0.962357142857 0.74925 0.463821428571
0.25 0.214285714286 0.142857142857 0.678571428571 0.857142857143 0.001 0.001 0.001 0.178392857143 0.001
0.357142857143 0.214285714286 0.357142857143 0.0357142857143 0.0357142857143 0.855428571429 0.962357142857 0.0356428571429 0.001 0.4995
0.142857142857 0.214285714286 0.178571428571 0.107142857143 0.0357142857143 0.142571428571 0.001 0.001 0.0713571428571 0.0356785714286
200 changes: 200 additions & 0 deletions data/example/peaks1_demo.bed
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chr1 1711300 1711875 288 442.69
chr1 2179623 2180121 249 118.61
chr1 4717268 4717738 235 137.59
chr1 5285608 5286259 326 238.79
chr1 5327637 5327962 163 224.29
chr1 5891961 5892484 262 120.82
chr1 6299275 6299774 250 162.3
chr1 6333345 6333664 160 169.12
chr1 6555505 6556038 267 105.78
chr1 7948825 7949280 228 158.02
chr1 8520004 8520511 254 174.67
chr1 8791112 8791718 303 456.36
chr1 9774229 9774869 320 148.97
chr1 10378111 10378545 217 172.99
chr1 11040248 11040716 234 185.31
chr1 12675919 12676282 182 100.16
chr1 15710722 15711393 336 2116.81
chr1 15835213 15835740 264 157.66
chr1 15995489 15995864 188 354.12
chr1 17796461 17797045 292 438.98
chr1 17891852 17892421 285 195.35
chr1 17992477 17992830 177 118.42
chr1 18621233 18621577 172 142.76
chr1 19239588 19239835 124 125.73
chr1 19332467 19332974 254 134.22
chr1 20113313 20113843 265 105.78
chr1 20732601 20732913 156 142.22
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chr1 24635002 24635522 260 202.21
chr1 26218913 26219264 176 108.62
chr1 26297540 26297861 161 217.93
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chr1 27949294 27949539 123 180.74
chr1 29827995 29828537 271 208.58
chr1 31277574 31278168 297 181.44
chr1 31328482 31328984 251 165.28
chr1 32903768 32904263 248 244.48
chr1 33446218 33446643 213 229.27
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chr1 36020428 36020830 201 142.61
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chr1 38518683 38519184 251 100.4
chr1 38751520 38752022 251 107.8
chr1 38757745 38758153 204 299.46
chr1 39419068 39419594 263 186.23
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chr1 39467160 39467671 256 186.56
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chr1 44126035 44126530 248 637.62
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chr1 44883185 44883590 203 277.3
chr1 45008830 45009367 269 118.29
chr1 45154924 45155416 246 129.25
chr1 46509304 46509844 270 333.17
chr1 47143023 47143426 202 114.82
chr1 47578880 47579191 156 125.73
chr1 48471075 48471426 176 101.67
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chr1 53896423 53896916 247 165.75
chr1 53914211 53914545 167 124.34
chr1 56918864 56919462 299 174.22
chr1 57015724 57016204 240 122.14
chr1 57404841 57405193 176 139.17
chr1 58472199 58472830 316 397.3
chr1 58497062 58497521 230 147.73
chr1 61471149 61471704 278 134.82
chr1 61943103 61943349 123 278.34
chr1 62642464 62642802 169 106.43
chr1 62647219 62647548 165 112.65
chr1 62777012 62777400 194 101.87
chr1 63655397 63655845 224 128.81
chr1 63664805 63665149 172 133.98
chr1 64196896 64197261 183 148.64
chr1 64470009 64470373 182 154.09
chr1 64938380 64939038 329 299.54
chr1 64963033 64963565 266 156.4
chr1 66901961 66902314 177 125.73
chr1 67981284 67981733 225 124.05
chr1 68742164 68742479 158 110.4
chr1 71927901 71928280 190 153.82
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chr1 75808397 75808851 227 136.05
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chr1 156662762 156663200 219 120.9
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chr1 164446658 164447024 183 126.58
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chr1 171400919 171401625 353 464.04
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chr1 175028671 175029010 170 156.27
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chr1 175801471 175801950 240 137.89
chr1 175834254 175834812 279 269.84
chr1 177139806 177140284 239 315.37
chr1 178235754 178236304 275 166.93
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chr1 182926904 182927450 273 559.37
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chr1 183290213 183290695 241 103.54
chr1 183372346 183373091 373 855.63
chr1 183914565 183914955 195 175.44
chr1 184466980 184467571 296 470.81
chr1 184869573 184870051 239 123.3
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