Metadata Upload #435
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Metadata Upload | |
| on: | |
| # scheduled submission every day at 13.00, 19.00 and 24.00 CET | |
| schedule: | |
| - cron: '00 12,18,23 * * *' | |
| # needed to trigger manually | |
| workflow_dispatch: | |
| jobs: | |
| scheduled-submit: | |
| if: github.repository_owner == 'european-modelling-hubs' | |
| runs-on: ubuntu-latest | |
| steps: | |
| # Checkout the python tools repo | |
| # used to authenticate and validate the PR | |
| # ------------------------------------------- | |
| - name: checkout python tools repo | |
| uses: actions/checkout@v3 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| repository: 'european-modelling-hubs/hub-tools' | |
| ref: 'main' | |
| path: tools | |
| # Checkout the data repo | |
| - name: checkout data repo | |
| uses: actions/checkout@v3 | |
| with: | |
| token: ${{ secrets.GITHUB_TOKEN }} | |
| repository: 'european-modelling-hubs/flu-forecast-hub' | |
| ref: 'main' | |
| path: './repo/' | |
| # Get the list of changes from a json file | |
| - name: Get changes list | |
| id: get_changes | |
| run: | | |
| echo "Read changes list from json" | |
| content=`cat ./repo/.github/data-storage/metadata_db.json` | |
| content="${content//'%'/'%25'}" | |
| content="${content//$'\n'/'%0A'}" | |
| content="${content//$'\r'/'%0D'}" | |
| echo "::set-output name=packageJson::$content" | |
| - run: | | |
| echo "${{ steps.get_changes.outputs.packageJson }}" | |
| # Trigger server-side updating and UI deploy | |
| # -------------------------------------------- | |
| # WEBHOOK | |
| - name: Invoke deployment hook | |
| id: invoke_webhook | |
| env: | |
| disease_name: ${{ vars.DISEASE_NAME }} | |
| webhook_url: ${{ secrets.WEB_HOOK_URL }} | |
| webhook_secret: ${{ secrets.WEB_HOOK_SECRET }} | |
| data: ${{ steps.get_changes.outputs.packageJson }} | |
| data_type: "metadata" | |
| run: | | |
| pip install requests | |
| python ./tools/code/ws_webhook.py | |
| - name: trace only | |
| run: | | |
| echo "webhook results: ${{ steps.invoke_webhook.outputs.run_results }}" | |
| # SUCCESSFUL RUN | |
| # -------------------------------------------- | |
| - name: Successful run | |
| if: ${{ fromJSON(steps.invoke_webhook.outputs.run_results).status == 'success'}} | |
| env: | |
| wh_response: ${{ steps.invoke_webhook.outputs.run_results }} | |
| run: | | |
| echo "UPLOAD SUCCEEDED - clear djson db" | |
| python ./tools/code/clear_data_storage.py --storage_type "model-metadata" | |
| # RUN FAILURE | |
| # -------------------------------------------- | |
| - name: Some ingestion failed | |
| if: ${{ fromJSON(steps.invoke_webhook.outputs.run_results).status == 'failure'}} | |
| env: | |
| wh_response: ${{ steps.invoke_webhook.outputs.run_results }} | |
| run: | | |
| echo "UPLOAD FAILED - Some ingestion failed" | |
| python ./tools/code/clear_data_storage.py --storage_type "model-metadata" | |
| # ERROR RUN | |
| # -------------------------------------------- | |
| - name: Error | |
| if: ${{ steps.invoke_webhook.outputs.run_results.status == 'error'}} | |
| run: | | |
| echo "UPLOAD FAILED - ignore djson db cleaning" | |
| exit 1 | |
| # Final commit | |
| # -------------------------------------------- | |
| - name: Commit changes | |
| if: ${{ fromJSON(steps.invoke_webhook.outputs.run_results).status == 'failure' || fromJSON(steps.invoke_webhook.outputs.run_results).status == 'success' }} | |
| uses: EndBug/add-and-commit@v7 | |
| with: | |
| cwd: './repo' | |
| message: "Update metadata db json" | |
| default_author: github_actions | |
| push: true |