MergeRecents #23

	name: MergeRecents

	on:

	workflow_dispatch:

	# scheduled run every Friday at 20.00 (19.00 UTC)
	schedule:
	- cron: '00 19 * * 5'

	jobs:

	merge_recents_job:
	if: github.repository_owner == 'european-modelling-hubs'
	runs-on: ubuntu-latest
	steps:

	# Checkout the python tools repo
	# -------------------------------------------
	- name: checkout python tools repo
	uses: actions/checkout@v3
	with:
	token: ${{ secrets.GITHUB_TOKEN }}
	repository: 'european-modelling-hubs/hub-tools'
	ref: 'main'
	path: './tools/'

	# Checkout the data repository
	# -------------------------------------------
	- name: checkout data repo
	uses: actions/checkout@v3
	with:
	token: ${{ secrets.GITHUB_TOKEN }}
	repository: 'european-modelling-hubs/flu-forecast-hub'
	ref: 'main'
	path: './repo/'



	# Run Pyton code
	# -------------------------
	- uses: actions/setup-python@v4
	with:
	python-version: '3.10'

	# - run: pip install pandas==1.2.5 numpy==1.22.4

	- name: do the merge
	id: do_the_merge
	env:
	disease_name: ${{ vars.DISEASE_NAME }}

	run: \|
	python ./tools/code/merge_recent_data.py --repository "./repo" --source_list "ERVISS FluID"

	- name: Commit data repo changes
	uses: EndBug/add-and-commit@v7
	with:
	cwd: './repo'
	message: "Update data storage"
	default_author: github_actions
	push: true

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