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@seqscope

SeqScope

SeqScope - Microscopic Resolution Spatial Transcriptomics

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  1. ficture ficture Public

    Python 31 4

  2. STtools STtools Public

    Forked from jyxi7676/STtools

    R 10 2

  3. NovaScope NovaScope Public

    The pipeline to process Novaseq dataset, from fastq to nge.

    Python 4

  4. spatula spatula Public

    A C++ Tool for Spatial Transcriptomics

    C++ 2

  5. historef historef Public

    automated referencing tool between Seq-Scope sequence data and H&E histology image

    Python

  6. NovaScope-exemplary-downstream-analysis NovaScope-exemplary-downstream-analysis Public

    Exemplary downstream analysis for NovaScope

    HTML

Repositories

Showing 7 of 7 repositories
  • NovaScope Public

    The pipeline to process Novaseq dataset, from fastq to nge.

    seqscope/NovaScope’s past year of commit activity
    Python 4 Apache-2.0 0 0 0 Updated Jan 3, 2025
  • ficture Public
    seqscope/ficture’s past year of commit activity
    Python 31 4 0 0 Updated Dec 18, 2024
  • spatula Public

    A C++ Tool for Spatial Transcriptomics

    seqscope/spatula’s past year of commit activity
    C++ 2 Apache-2.0 0 2 0 Updated Dec 15, 2024
  • NovaScope-exemplary-downstream-analysis Public

    Exemplary downstream analysis for NovaScope

    seqscope/NovaScope-exemplary-downstream-analysis’s past year of commit activity
    HTML 0 Apache-2.0 0 0 0 Updated Aug 30, 2024
  • historef Public

    automated referencing tool between Seq-Scope sequence data and H&E histology image

    seqscope/historef’s past year of commit activity
    Python 0 0 0 0 Updated May 28, 2024
  • STARxy Public Forked from Yichen-Si/STAR

    Modified version of STAR for spatial transcriptomics

    seqscope/STARxy’s past year of commit activity
    C++ 0 MIT 535 0 0 Updated May 28, 2024
  • STtools Public Forked from jyxi7676/STtools
    seqscope/STtools’s past year of commit activity
    R 10 7 0 0 Updated Jul 15, 2022

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