Release 1.0.0 (240111)

senaite · Jan 11, 2024 · a897c59 · a897c59
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diff --git a/README.rst b/README.rst
@@ -24,7 +24,7 @@ This extension adds Diseases, Signs and Symptoms handling to `SENAITE LIMS`_.
 License
 -------
 
-**SENAITE.DIAGNOSIS** Copyright (C) 2022-2023 RIDING BYTES & NARALABS
+**SENAITE.DIAGNOSIS** Copyright (C) 2022-2024 RIDING BYTES & NARALABS
 
 This program is free software; you can redistribute it and/or modify it under
 the terms of the `GNU General Public License version 2`_ as published

diff --git a/docs/changelog.rst b/docs/changelog.rst
@@ -1,7 +1,7 @@
 Changelog
 =========
 
-1.0.0 (Unreleased)
+1.0.0 (2024-01-11)
 ------------------
 
 - First version
diff --git a/setup.py b/setup.py
@@ -36,8 +36,7 @@
     include_package_data=True,
     zip_safe=False,
     install_requires=[
-        "senaite.lims>=2.3.0",
-        "senaite.patient",
+        "senaite.patient>=1.4.0",
     ],
     extras_require={
         "test": [

diff --git a/src/senaite/__init__.py b/src/senaite/__init__.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 try:

diff --git a/src/senaite/diagnosis/__init__.py b/src/senaite/diagnosis/__init__.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import logging

diff --git a/src/senaite/diagnosis/browser/__init__.py b/src/senaite/diagnosis/browser/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/browser/content/__init__.py b/src/senaite/diagnosis/browser/content/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/browser/content/diseases.py b/src/senaite/diagnosis/browser/content/diseases.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import collections

diff --git a/src/senaite/diagnosis/browser/content/etiologicagents.py b/src/senaite/diagnosis/browser/content/etiologicagents.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import collections

diff --git a/src/senaite/diagnosis/browser/content/symptoms.py b/src/senaite/diagnosis/browser/content/symptoms.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import collections

diff --git a/src/senaite/diagnosis/browser/theme/__init__.py b/src/senaite/diagnosis/browser/theme/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/browser/theme/icons.py b/src/senaite/diagnosis/browser/theme/icons.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import os

diff --git a/src/senaite/diagnosis/config.py b/src/senaite/diagnosis/config.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 PRODUCT_NAME = "senaite.diagnosis"

diff --git a/src/senaite/diagnosis/content/__init__.py b/src/senaite/diagnosis/content/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/content/analysisrequest.py b/src/senaite/diagnosis/content/analysisrequest.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from archetypes.schemaextender.interfaces import IBrowserLayerAwareExtender

diff --git a/src/senaite/diagnosis/content/disease.py b/src/senaite/diagnosis/content/disease.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from AccessControl import ClassSecurityInfo

diff --git a/src/senaite/diagnosis/content/diseases.py b/src/senaite/diagnosis/content/diseases.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from plone.dexterity.content import Container

diff --git a/src/senaite/diagnosis/content/etiologicagent.py b/src/senaite/diagnosis/content/etiologicagent.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from AccessControl import ClassSecurityInfo

diff --git a/src/senaite/diagnosis/content/etiologicagents.py b/src/senaite/diagnosis/content/etiologicagents.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from plone.dexterity.content import Container

diff --git a/src/senaite/diagnosis/content/fields.py b/src/senaite/diagnosis/content/fields.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from archetypes.schemaextender.field import ExtensionField

diff --git a/src/senaite/diagnosis/content/symptom.py b/src/senaite/diagnosis/content/symptom.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from AccessControl import ClassSecurityInfo

diff --git a/src/senaite/diagnosis/content/symptoms.py b/src/senaite/diagnosis/content/symptoms.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from plone.dexterity.content import Container

diff --git a/src/senaite/diagnosis/interfaces.py b/src/senaite/diagnosis/interfaces.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from bika.lims.interfaces import IDoNotSupportSnapshots

diff --git a/src/senaite/diagnosis/patches/__init__.py b/src/senaite/diagnosis/patches/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/patches/content/__init__.py b/src/senaite/diagnosis/patches/content/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/patches/content/analysisrequest.py b/src/senaite/diagnosis/patches/content/analysisrequest.py
@@ -15,10 +15,9 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
-
 def getRawSymptoms(self):  # noqa camelcase
     """Returns the UIDs of the Symptom objects assigned to the Sample
     """
@@ -94,4 +93,4 @@ def getEtiologicAgents(self):  # noqa camelcase
 def setEtiologicAgents(self, value):  # noqa camelcase
     """Sets the etiologic agents to the sample
     """
-    self.getField("EtiologicAgents").set(self, value)
+    self.getField("EtiologicAgents").set(self, value)
diff --git a/src/senaite/diagnosis/permissions.py b/src/senaite/diagnosis/permissions.py
@@ -15,11 +15,10 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 # Field permissions for Samples (aka AnalysisRequest)
-
 FieldEditDateOfDiagnosis = "senaite.diagnosis: Field: Edit Date of Diagnosis"
 FieldEditDateOfOnset = "senaite.diagnosis: Field: Edit Date of Onset"
 FieldEditEtiologicAgents = "senaite.diagnosis: Field: Edit Etiologic Agents"

diff --git a/src/senaite/diagnosis/setuphandlers.py b/src/senaite/diagnosis/setuphandlers.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from bika.lims import api

diff --git a/src/senaite/diagnosis/subscribers/__init__.py b/src/senaite/diagnosis/subscribers/__init__.py
@@ -15,5 +15,5 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
diff --git a/src/senaite/diagnosis/subscribers/upgrade.py b/src/senaite/diagnosis/subscribers/upgrade.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 from bika.lims.api import get_portal

diff --git a/src/senaite/diagnosis/utils.py b/src/senaite/diagnosis/utils.py
@@ -15,7 +15,7 @@
 # this program; if not, write to the Free Software Foundation, Inc., 51
 # Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
 #
-# Copyright 2022 by it's authors.
+# Copyright 2022-2024 by it's authors.
 # Some rights reserved, see README and LICENSE.
 
 import re