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Not needed if the profile includes the option
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muffato authored Jun 25, 2024
1 parent ee63727 commit 0bd81bb
Showing 1 changed file with 1 addition and 2 deletions.
3 changes: 1 addition & 2 deletions .github/workflows/sanger_test.yml
Original file line number Diff line number Diff line change
Expand Up @@ -18,8 +18,7 @@ jobs:
workdir: ${{ secrets.TOWER_WORKDIR_PARENT }}/work/${{ github.repository }}/work-${{ github.sha }}
parameters: |
{
"outdir": "${{ secrets.TOWER_WORKDIR_PARENT }}/results/${{ github.repository }}/results-${{ github.sha }}",
"align": true
"outdir": "${{ secrets.TOWER_WORKDIR_PARENT }}/results/${{ github.repository }}/results-${{ github.sha }}"
}
profiles: test_align,sanger,singularity,cleanup

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